Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr17310g00001 ATGTCTTTTAGAGAAAAGGAGATGGAAGAAGTAGAATTAAGGGGTTCAAAGTGCCAAGACTGTGGGAACCAAGCCAAGAAGGAATGTTCATACTCAAGGTGCAGAACTTGCTGCAAGAACAAAGGCTTTCAGTGCCAAACCCATATCAAGAGCACTTGGATTCCTGTCGATAGGAGGCGCCGCAAGGAGGACCCACACCCTTCTCCCGGAGATATTCCTCAAAACCACAACCCATATTCAGGTTTAGAGTTGAAATTTCCGGCTGCTACGAATTCGATGGCTATGTTTCGGTGCGTTCAGGTTCGTTCTATGGATGATGCGGTTAATGAAATAGCATATCAAACATCTGTGAACATTGGAGGACATGTATTTAGTGGACTACTTTATGATCAAGGTCCTGACCAAAGCTATAGTAATAGGGGTGAGAGTTCCACAGGCCTTGTTGATCAGCAGCAGAATCTTGGTCTTATGAATATTGCTTCAAGAGATAGTAGTGGTGCAACTATGACCTCTGCTGGTCACCATGACCCTCTTTTAACACCACCACCGTATCCGTTTCCCCTTGCTCCCTTCAGGCCTGGTATGCCATATTTCACATACCCAAGATCTTAG 612 0.451 MSFREKEMEEVELRGSKCQDCGNQAKKECSYSRCRTCCKNKGFQCQTHIKSTWIPVDRRRRKEDPHPSPGDIPQNHNPYSGLELKFPAATNSMAMFRCVQVRSMDDAVNEIAYQTSVNIGGHVFSGLLYDQGPDQSYSNRGESSTGLVDQQQNLGLMNIASRDSSGATMTSAGHHDPLLTPPPYPFPLAPFRPGMPYFTYPRS 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr17310g00001 203 Pfam Domain of unknown function (DUF702) 84 134 - -
Mupr17310g00001 203 Pfam Domain of unknown function (DUF702) 15 64 - -
Mupr17310g00001 203 PANTHER PROTEIN LATERAL ROOT PRIMORDIUM 1 13 181 IPR007818 GO:0003700|GO:0006355
Mupr17310g00001 203 MobiDBLite consensus disorder prediction 56 79 - -
Mupr17310g00001 203 NCBIfam LRP1 C-terminal domain 85 133 IPR006511 -
Mupr17310g00001 203 NCBIfam putative zinc finger domain, LRP1 type 17 59 IPR006510 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr17310g00001 Mupr-Chr17310 6334 7127 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr17310g00001 13 132 C2H2 Transcription Factor Family AT2G21400 53.333 9.63e-45 145
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SRS Mupr17310g00001 DUF702 5.9e-19 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr17310g00001 - - pvu:PHAVU_009G004300g 308.531