Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr1730g00001 TCTGCTTTATATGAAGGCATATATAGCTCCAAGTTCCTCGCCAAGCTTCCTACGAGAGAGAAAATAGATACAAGACTAGAAGAACCTTTCATAGAGTTGAACAAGGTGGATCGAAGGCATGGGAAGAGGCCTCTCCCTTCTGATCATGCATCAAGGGAGAAAAGGGAAGATTTCAATTTCCCTATTCACCCATCTCCATATAAGAGCCAAGGGGAAGAAGCTTCTCCATTCCCCTTTATACATCCAATCAACACTGGTGATGATAGCACCCCTTCTATTCCAATACCACAATATGGGCAACTAAGCACTTCTAGCTTGATTGAGACGCAGGACCCATCCCAGCAGCCTTTAAATCAAGGCAATGCGAGAAAAAGACACTACAGAGGAGTTAGGCAGCGACCGTGGGGCAAATGGGCTGCCGAAATCCGCGACCCTAAAAAGGCTGCTAGAGTGTGGCTTGGCACGTTTGACACGGCAGAGGCTGCCGCTGCTGCTTACGACGCTGCTGCCTTGAAGTTCAAAGGATCCAAAGCCAAGCTCAATTTCCCAGAACACGTTCTCCTTGCTCCACTCTCATCACAACCTAGCAATCAAAATAATAATAATAATAATAATAATAATATTAATTATGCTTCTTCAGCTCCTGCACCACCGCCACCGCCACCACCACCGGTTTATCAACCACAAGAACAAGGGTTCCCCAACCTAATGCAGTACGCGCAGCTTCTTTGGAGTAGGGATGATGATGATCTACAGCGTGTTGCTTCGGGCCTTCAACATCATCGTCGTCGTCCCAATGAGTCTTCTTATGATTCAAGTTCTTCGACTTTGTTCTCATCGTCGTCCTCTTCTATGAATGTGTCTGATCAACAGCAGGTTGGAGATGACACAAGTGCTGCTCCCAAGGGTGGACATTATTATGGTTCCTTTTTCAGAGGGAATGGTTTTCATGACAACAAT 960 0.4615 SALYEGIYSSKFLAKLPTREKIDTRLEEPFIELNKVDRRHGKRPLPSDHASREKREDFNFPIHPSPYKSQGEEASPFPFIHPINTGDDSTPSIPIPQYGQLSTSSLIETQDPSQQPLNQGNARKRHYRGVRQRPWGKWAAEIRDPKKAARVWLGTFDTAEAAAAAYDAAALKFKGSKAKLNFPEHVLLAPLSSQPSNQNNNNNNNNNINYASSAPAPPPPPPPPVYQPQEQGFPNLMQYAQLLWSRDDDDLQRVASGLQHHRRRPNESSYDSSSSTLFSSSSSSMNVSDQQQVGDDTSAAPKGGHYYGSFFRGNGFHDNN 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr1730g00001 320 MobiDBLite consensus disorder prediction 257 302 - -
Mupr1730g00001 320 SMART rav1_2 126 189 IPR001471 GO:0003700|GO:0006355
Mupr1730g00001 320 MobiDBLite consensus disorder prediction 269 297 - -
Mupr1730g00001 320 PRINTS Ethylene responsive element binding protein signature 127 138 IPR001471 GO:0003700|GO:0006355
Mupr1730g00001 320 PRINTS Ethylene responsive element binding protein signature 149 165 IPR001471 GO:0003700|GO:0006355
Mupr1730g00001 320 MobiDBLite consensus disorder prediction 36 73 - -
Mupr1730g00001 320 MobiDBLite consensus disorder prediction 213 229 - -
Mupr1730g00001 320 Gene3D AP2/ERF domain 125 185 IPR036955 GO:0003700|GO:0006355
Mupr1730g00001 320 Pfam AP2 domain 126 175 IPR001471 GO:0003700|GO:0006355
Mupr1730g00001 320 MobiDBLite consensus disorder prediction 36 61 - -
Mupr1730g00001 320 FunFam Ethylene-responsive transcription factor 2 125 184 - -
Mupr1730g00001 320 CDD AP2 126 185 IPR001471 GO:0003700|GO:0006355
Mupr1730g00001 320 MobiDBLite consensus disorder prediction 191 231 - -
Mupr1730g00001 320 PANTHER DNA-BINDING DOMAIN 104 285 IPR044808 GO:0003700|GO:0009873
Mupr1730g00001 320 ProSiteProfiles AP2/ERF domain profile. 126 183 IPR001471 GO:0003700|GO:0006355
Mupr1730g00001 320 SUPERFAMILY DNA-binding domain 126 184 IPR016177 GO:0003677
Mupr1730g00001 320 MobiDBLite consensus disorder prediction 110 130 - -
Mupr1730g00001 320 MobiDBLite consensus disorder prediction 191 212 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr1730g00001 Mupr-Chr1730 9109 10688 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr1730g00001 83 193 AP2-EREBP Transcription Factor Family AT5G61890 63.478 4.57e-40 139
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Mupr1730g00001 AP2 1.9e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr1730g00001 - - gmx:106797385 383.645