Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr17304g00004 ATGGCAACTTATTACACAAGTTCAAGTAATCAAAGGGATGCAGTGCCTATGCTGTGTCTTAGGGAGCCTTTGCCTAATTCGTACCCCGAGACATCGATGTTACCGAGCAACATGACATTGTATATGAACTCTGGTTCATATTCAGAAGCACTGTCTGGCAATTCTCAGCAGCAAAACAATTGCTTTGTGTTTCCATCACCATCTGTAGGTGCTTCACATTCCACTCCTGAACAGCAAGAAATCTTGGCTAATTTTGGTGGGTTCCAAACTGGGGTTCATGATTTCAGTGCATGGAGGGAGGGTAGAAGTGAGGTGTTAGTCAGACAACCTATGGATGGACAGAACTTGCAAGGTCAGGGATTATCTCTCAGCCTTGGAACCCACATACCCCCAGGAACTCCAATGCCTTCTATCCATGATAGGAATCATCATAGTTCAAGTTTTGACTCATTTTTGGGTACTAATCCATCAATTTCAGGCAATGAGGCCTATCAAAGAGGATCATCTAGGGATGAGGGTATGAGACATTCTGAAATTTTCCCACCTGGGTTGCCTGAAGCTAGTCAAGATTTGAGCAGGGCAGACTATTCATTTCATGGAATACCTGGTGTTGGAAGAACAGTTCCTAGCTCCAAATATCTCAAGGCAGTGCAACAACTGCTTGATGAAGTTGTTGACATCCGAAAAGCTATTGAAAGACCTGATATGAGAAGTCATAGCACACATGACAACTCTAAGAAGAACTCTAAGGAGGGTGATGAGCAACTAGAAAATGAAAGGCCTTCTGCAAATGGATTGCCTAATTCTCAAGCTTCAGCTAGTAACTCCTCTTGTGAGCTTTCACATGCTGAAAAACAAGAACTACACAACAAGTTAACAAAGCTTTTGTCAATGTTGGATGAGGTTGACAATAGGTTCAAACAATATTATCAGCAGATGCAGATTGTGGTGTCATCATTTGATGTGATAGCAGGATGTGGGGCAGCTAAACCATACACAGCCCTTGCTCTTCAGACCATTTCATGCCATTTTCGGTGTTTGCGTGATGCAATCACTGGTCAAATCAGTGCAACACAAAAGAATCTTGGAGAGCTTGATGCTTCTGGAAGTAATAAAGGAGTTGGAATGGCAAGACTAAAGTATGTGGATCAACAAATCCGACAACAGAGGGCTCTTCAGCAGCTTGGCATGATGCAACATGCATGGAGACCACAAAGGGGGCTTCCAGAAAGCTCTGTTTCAATTCTTCGCGCTTGGCTTTTTGAGCATTTCCTTCATCCCTATCCAAAGGATTCTGATAAGAGCATGCTAGCAAGACAGACAGGCTTGACCAGAAGTCAGGTCTCAAATTGGTTTATAAATGCACGTGTGCGTCTATGGAAACCTATGATTGAGGAGATGTACAAGAAAGAGACTTGTGATACTGACATGGAATCGAGTTCTTCATCTGAAAATGTGTCCAAGGTAACAAAAAGTGATGTCAAGACCTCCAATGATATGGGTGACGATTCGCAGCACTGTCAAAGTCCAATAGTAGCCAATACAAATCACAGTGGTGGACAAGCTAAGGACCTCAGATATGATCAAGTTCTTGATACAGAAAACATGGCATCCACTGGATTAGTTAGTCTCATAAGTGGAGGTCATGAGGCTGAAACCGAACATGGGTCAGTAAAGCAGACAGACCGTGGTCTCTTCCTTGATGAAACAGTTGTTCAGTCTGATGAAGCTAATGACAGGTTTGTGGCAGTTGGTCCAACATGCCAAATGTCAGAGTTTGGTAGGTTCAAGTCAGGAAGTGGAGTGTCTCTAACATTAGGTTTGCAGCATTGTGAAGGAGGTAATTTTTTGCCTGGTGAGACTCATCTTAGTTTGGTTTCCATGAGGGAGGATGATATCTTCAACAATTGGAGTAGAGACAGCAGAACTTGA 1932 0.4301 MATYYTSSSNQRDAVPMLCLREPLPNSYPETSMLPSNMTLYMNSGSYSEALSGNSQQQNNCFVFPSPSVGASHSTPEQQEILANFGGFQTGVHDFSAWREGRSEVLVRQPMDGQNLQGQGLSLSLGTHIPPGTPMPSIHDRNHHSSSFDSFLGTNPSISGNEAYQRGSSRDEGMRHSEIFPPGLPEASQDLSRADYSFHGIPGVGRTVPSSKYLKAVQQLLDEVVDIRKAIERPDMRSHSTHDNSKKNSKEGDEQLENERPSANGLPNSQASASNSSCELSHAEKQELHNKLTKLLSMLDEVDNRFKQYYQQMQIVVSSFDVIAGCGAAKPYTALALQTISCHFRCLRDAITGQISATQKNLGELDASGSNKGVGMARLKYVDQQIRQQRALQQLGMMQHAWRPQRGLPESSVSILRAWLFEHFLHPYPKDSDKSMLARQTGLTRSQVSNWFINARVRLWKPMIEEMYKKETCDTDMESSSSSENVSKVTKSDVKTSNDMGDDSQHCQSPIVANTNHSGGQAKDLRYDQVLDTENMASTGLVSLISGGHEAETEHGSVKQTDRGLFLDETVVQSDEANDRFVAVGPTCQMSEFGRFKSGSGVSLTLGLQHCEGGNFLPGETHLSLVSMREDDIFNNWSRDSRT 643
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr17304g00004 643 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 124 485 - -
Mupr17304g00004 643 SUPERFAMILY Homeodomain-like 403 468 IPR009057 -
Mupr17304g00004 643 MobiDBLite consensus disorder prediction 232 282 - -
Mupr17304g00004 643 FunFam BEL1-like homeodomain protein 4 405 467 - -
Mupr17304g00004 643 ProSiteProfiles 'Homeobox' domain profile. 399 462 IPR001356 GO:0003677
Mupr17304g00004 643 CDD homeodomain 402 463 IPR001356 GO:0003677
Mupr17304g00004 643 MobiDBLite consensus disorder prediction 232 258 - -
Mupr17304g00004 643 Pfam Homeobox KN domain 419 458 IPR008422 GO:0003677|GO:0006355
Mupr17304g00004 643 Pfam Associated with HOX 208 352 IPR006563 -
Mupr17304g00004 643 Gene3D - 398 476 - -
Mupr17304g00004 643 MobiDBLite consensus disorder prediction 155 188 - -
Mupr17304g00004 643 SMART HOX_1 402 466 IPR001356 GO:0003677
Mupr17304g00004 643 Coils Coil 285 305 - -
Mupr17304g00004 643 SMART prehox3 202 353 IPR006563 -
Mupr17304g00004 643 MobiDBLite consensus disorder prediction 261 281 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr17304g00004 Mupr-Chr17304 7053 9932 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr17304g00004 27 636 Homeobox Transcription Factor Family AT4G34610 42.949 8.43e-128 385
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-BELL Mupr17304g00004 POX 4.4e-49 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr17304g00004 - - gmx:100801522 1052.35