Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr17299g00001 ATGGTGCAAACAAGGAAGTTCAGAGGGGTCAGGCAACGCCATTGGGGTTCATGGGTATCGGAAATTCGCCACCCACTTCTGAAGAGGAGGGTGTGGCTGGGCACGTTCGAAACAGCAGAAGAAGCGGCACGAGCTTACGACCAAGCTGCCATATTGATGAGCGGGCGAAACGCGAAAACCAATTTCCCAATAGTCCAAACCTCCTCGGGTGACCCGAAGACGCTAACAACCCCTGACGAGACCCCATCAACTTCAAAGGAACTGGAAGAGATTCTGCACGCGAAGCTTCGAAAGTGTGGGAAGCTTCCGTCCCCTTCCATGACCTGCCTGAGGCTTGACCCCGAAAATTCCCACATTGGAGTGTGGCAAAAGCGCGCAGGGCAGCGTTCCGACTCGAACTGGGTAATGATGGTTCCGCTGGGAAAGAAAGGTGCCAATGAAGCTGGAGATAGTTCTCTGCCTCCTTCTTCTTCGTTTTCTGAGTGTAGTCAGACCCAACAAGCGGCACGGCAAGAGCTTGTGAGAACCGAGATGGATGAAGAAGAGAGAATTGCGCTGCAAATGATAGAAGAACTCCTCAGCAGGAACTGTCCCACTAGCCCTTCATTTAATAACATATAT 621 0.5185 MVQTRKFRGVRQRHWGSWVSEIRHPLLKRRVWLGTFETAEEAARAYDQAAILMSGRNAKTNFPIVQTSSGDPKTLTTPDETPSTSKELEEILHAKLRKCGKLPSPSMTCLRLDPENSHIGVWQKRAGQRSDSNWVMMVPLGKKGANEAGDSSLPPSSSFSECSQTQQAARQELVRTEMDEEERIALQMIEELLSRNCPTSPSFNNIY 207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr17299g00001 207 Gene3D AP2/ERF domain 5 65 IPR036955 GO:0003700|GO:0006355
Mupr17299g00001 207 MobiDBLite consensus disorder prediction 150 171 - -
Mupr17299g00001 207 SUPERFAMILY DNA-binding domain 6 64 IPR016177 GO:0003677
Mupr17299g00001 207 PRINTS Ethylene responsive element binding protein signature 7 18 IPR001471 GO:0003700|GO:0006355
Mupr17299g00001 207 PRINTS Ethylene responsive element binding protein signature 29 45 IPR001471 GO:0003700|GO:0006355
Mupr17299g00001 207 SMART rav1_2 6 69 IPR001471 GO:0003700|GO:0006355
Mupr17299g00001 207 MobiDBLite consensus disorder prediction 145 171 - -
Mupr17299g00001 207 MobiDBLite consensus disorder prediction 63 85 - -
Mupr17299g00001 207 FunFam Ethylene-responsive transcription factor 2 5 64 - -
Mupr17299g00001 207 Pfam AP2 domain 6 54 IPR001471 GO:0003700|GO:0006355
Mupr17299g00001 207 CDD AP2 6 65 IPR001471 GO:0003700|GO:0006355
Mupr17299g00001 207 MobiDBLite consensus disorder prediction 63 82 - -
Mupr17299g00001 207 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 5 159 - -
Mupr17299g00001 207 ProSiteProfiles AP2/ERF domain profile. 6 63 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr17299g00001 Mupr-Chr17299 6013 7414 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr17299g00001 1 196 AP2-EREBP Transcription Factor Family AT1G15360 58.416 2.29e-75 224
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Mupr17299g00001 AP2 1e-12 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr17299g00001 - - gmx:100779921 348.206