Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr17291g00001 ATGGCTCACGACACAGACAGTGCCACCTCTAACCTTCTTCTTTGTTCGGAGAACAGCAGTACCTGCTTCGTTGATGATTTGGAATGTGATGAGTCTGTAATCTCGCATTTCTGGGACCACAGAAACGCTTACTCTGAGCACGGGGGTAGTGGATCGGAGTACCTAGCGGGTTTTGTGGCGCAGAGTGAGGAAACTGTTAGGGCTATGGTTGAGAGAGAGAGGGAGCATTTGCCCAGGGATGATTACCTCAAAAGGCTCAGGACTGGGGACTTGGACTTGAGTGTTAGAAAGGAGGCTCTTGATTGGATTTGTAAGGCTCATGCTTATTTTGGATTTGGATCCTTGAGTTTTTGTTTATCAGTGAACTACTTGGATCGCTTCCTATCGGTGTTTGAATTGCCGAAAGGAACAAGCTGGACTGTGCAATTGTTAGCTGTAGCTTGCCTGTCAATTGCAGCTAAAATGGAGGAGAATAAAGTGCCTCTATCTTTAGATTTACAGGTTGGAGAACCAAAGTTTTTGTTTGAAGCTAGAACCATTCAAAGAATGGAACTACTGCTGTTAAGTGCATTGAGATGGAAAATGCGCGCTTCAACCCCTTGTTCCTTCATAGATTACTTCCTTAGCAAGATCACTTGTGAGCAGCCTCCAGCAAAGTCATCCATATCAAGATCAGTGCAGCTCATCCTTCGCATAATCAGAGGTATTGACTTCTTGGAATTCCGGCCTTCTGAGATTGCTGCGGCTGTGGCAATTTCTGTTTTTTTAAGGGAATCGCAAGAAAAAGAGATTGATAAAGCCATAGCTGATTTCTTAGTAGTAGAGAAGGGAAGAGTTCTAAAGTGTGTTGAATTGATAAGAGATTTGTCCTTGATCAATGTTTATGCTAATATAGGCAATAAGGTGGCATTTATGCCCCAAAGTCCAGCTGGGGTGCTGGATGCTGGGTGCTTAAGTTGTAAGAGTGATGAATTAACAGTTGGGTCATGTCCAAATTCTTCACATAAGAGTCCAAATACTAAGAGGAGCAAACCAGATGGACCTTCTAATGAAACCTCCAAGTCATGA 1068 0.4345 MAHDTDSATSNLLLCSENSSTCFVDDLECDESVISHFWDHRNAYSEHGGSGSEYLAGFVAQSEETVRAMVEREREHLPRDDYLKRLRTGDLDLSVRKEALDWICKAHAYFGFGSLSFCLSVNYLDRFLSVFELPKGTSWTVQLLAVACLSIAAKMEENKVPLSLDLQVGEPKFLFEARTIQRMELLLLSALRWKMRASTPCSFIDYFLSKITCEQPPAKSSISRSVQLILRIIRGIDFLEFRPSEIAAAVAISVFLRESQEKEIDKAIADFLVVEKGRVLKCVELIRDLSLINVYANIGNKVAFMPQSPAGVLDAGCLSCKSDELTVGSCPNSSHKSPNTKRSKPDGPSNETSKS 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr17291g00001 355 CDD CYCLIN_AtCycD-like_rpt2 199 286 - -
Mupr17291g00001 355 ProSitePatterns Cyclins signature. 96 127 IPR006671 -
Mupr17291g00001 355 Pfam Cyclin, C-terminal domain 199 290 IPR004367 -
Mupr17291g00001 355 Pfam Cyclin, N-terminal domain 66 195 IPR006671 -
Mupr17291g00001 355 SMART cyclin_7 101 189 IPR013763 -
Mupr17291g00001 355 FunFam D6-type cyclin 192 284 - -
Mupr17291g00001 355 MobiDBLite consensus disorder prediction 327 355 - -
Mupr17291g00001 355 Gene3D - 79 196 - -
Mupr17291g00001 355 Gene3D - 68 285 - -
Mupr17291g00001 355 SUPERFAMILY Cyclin-like 61 195 IPR036915 -
Mupr17291g00001 355 CDD CYCLIN_AtCycD-like_rpt1 95 193 - -
Mupr17291g00001 355 SMART Cyclin_C_2 198 308 IPR004367 -
Mupr17291g00001 355 PANTHER CYCLINS 59 288 IPR039361 -
Mupr17291g00001 355 FunFam D2/4-type cyclin 79 191 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr17291g00001 Mupr-Chr17291 6198 8631 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr17291g00001 60 254 Core Cell Cycle Gene Families AT5G65420 61.929 1.74e-87 263
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr17291g00001 K18810 - gmx:100794010 540.806