Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr17282g00001 ATGAATGAGTATAACCCACCCTACTCTTTAGCAACTCCAATTGTCCTCCCCGTTTTGGGAACAACAAAGAGGATTTTGACTAGTCTCGCACCGACCTGTCAAATAGCCGTTCATCAAGAATGCTATGGAGCAAGAAATGTTCAAGACTTCACGTCATGGGTTTGTAAAGCTTGTGAAACACCTGACATCAAGCGGGAGTGTTGTCTTTGTCCTGTAAAAGGTGGTGCTCTAAAGCCAACCGATGTTGACACATTATGGGTTCATGTCACTTGTGCTTGGTTTCGACCTGAAGTATCTTTTGCTAGTGATGAAAAGATGGAGCCTGCTTTGGGTATTCTGAGTATTCCGTCAAATTCTTTTGTGAAGATTTGTGTTATTTGTAAGCAAATTCATGGTTCGTGCACACAATGTTGCAAGTGTTCCACTTATTTCCATGCCATGTGTGCATCAAGGGCCGGTTATCGCATGGAGTTGCATTGTATGGAGAAAAATGGTAAACAGACAACACGAATGGTTTCTTATTGTGCTTACCACAGAGCTCCCAATCCAGACACTGTTTTGATTATGCAAACCCCTCTTGGGGTCATTTCAACCAAAAGCCTTCTCCAAACTAAGAAAAAAGCTGGATCAAGGTTAATTTCATCTAAAAGAAATAAGGTTGAAGACACTTCTCCGGCAGAGAACCCTAGACATGAGTCATTCTCTGCTGCTAGATGTCAAATCTTTCAAAGAACAAATCATATAAAAAAGAGAGCAGCAGATGAAGCCATTCCTCATCATGTGAGGGGTCACTATCATCATCCTTTAGATGCAATATGGAGTTTAAATGCATACAGAGTGGTAGACAAACCTCCGGCATTTTCTTCTTTCAGAGAACGCCTTTATCATTTACAGAGAACCGAAAATGAACGAGTTTGCTTTGGTAGATCAGGCATACATGGGTGGGGCCTCTTTGCACGTCGAAATATTCAAGGAGGAGAAATGGTTCTTGAATATCGTGGTGAACAAGTGAGGCGCAGCATTGCAGATCTAAGGGAGGCACGCTATAGATTAGAAGGGAAAGACTGCTATCTTTTCAAGATAAGTGAAGAAGTGGTAGTAGATGCCACTGATAAAGGAAATATAGCACGGCTAATTAACCATTCTTGTATGCCGAATTGCTACGCAAGGATCATGAGTGTGGGTGATGATGAGAGCCGGATCTCGCTAATTGCCAAGACTGATGTCTCTGCTGGTGATGAACTAACGTATGACTACTTGTTTGATCCTGATGAGCCAGATGAATTTAAAATTATTTAA 1299 0.4165 MNEYNPPYSLATPIVLPVLGTTKRILTSLAPTCQIAVHQECYGARNVQDFTSWVCKACETPDIKRECCLCPVKGGALKPTDVDTLWVHVTCAWFRPEVSFASDEKMEPALGILSIPSNSFVKICVICKQIHGSCTQCCKCSTYFHAMCASRAGYRMELHCMEKNGKQTTRMVSYCAYHRAPNPDTVLIMQTPLGVISTKSLLQTKKKAGSRLISSKRNKVEDTSPAENPRHESFSAARCQIFQRTNHIKKRAADEAIPHHVRGHYHHPLDAIWSLNAYRVVDKPPAFSSFRERLYHLQRTENERVCFGRSGIHGWGLFARRNIQGGEMVLEYRGEQVRRSIADLREARYRLEGKDCYLFKISEEVVVDATDKGNIARLINHSCMPNCYARIMSVGDDESRISLIAKTDVSAGDELTYDYLFDPDEPDEFKII 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr17282g00001 432 SMART set_7 303 426 IPR001214 GO:0005515
Mupr17282g00001 432 MobiDBLite consensus disorder prediction 214 228 - -
Mupr17282g00001 432 FunFam Histone-lysine N-methyltransferase 277 432 - -
Mupr17282g00001 432 Pfam PHD-finger 33 59 - -
Mupr17282g00001 432 Gene3D SET domain 197 425 IPR046341 -
Mupr17282g00001 432 Pfam PHD-zinc-finger like domain 66 178 - -
Mupr17282g00001 432 CDD SET_SETD1-like 290 432 - -
Mupr17282g00001 432 ProSiteProfiles Extended PHD (ePHD) domain profile. 64 179 IPR034732 -
Mupr17282g00001 432 MobiDBLite consensus disorder prediction 207 232 - -
Mupr17282g00001 432 FunFam Histone-lysine N-methyltransferase 62 181 - -
Mupr17282g00001 432 PANTHER PHD FINGER PROTEINS 33 421 - -
Mupr17282g00001 432 Pfam SET domain 314 419 IPR001214 GO:0005515
Mupr17282g00001 432 SUPERFAMILY SET domain 297 424 IPR046341 -
Mupr17282g00001 432 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 60 181 IPR013083 -
Mupr17282g00001 432 CDD ePHD_ATX3_4_5_like 67 178 IPR041955 -
Mupr17282g00001 432 ProSiteProfiles SET domain profile. 303 420 IPR001214 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr17282g00001 Mupr-Chr17282 199 7950 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr17282g00001 33 178 C2H2 Transcription Factor Family AT3G14740 33.117 1.15e-15 76.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Mupr17282g00001 zf-HC5HC2H_2 7.1e-28 CL0390
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr17282g00001 - - gmx:100775276 788.104