Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr17281g00002 ATGACATCTTCATTCTCAACGCAGTTTGTGCAAATTCAGAACCTACCTCCTCGTTTTCATCATCATGTCCAGGGGAATTTTAGCCAAGATGTGTCAAAGGTTCCAAGGTCACATGTGGTCTGTAGCAGTACCAAATCACAGCTTGGTTACGGTAAAACATTGGCGTCAAGGTCTCATTATGCTGCGAGATTTTCTGTCTCACAACAATCTGAAACAAAATCAATCACATATAGGAGAATGACATGTATTAATGCTAAGGAAAATGTTGTAGAGCTGCAAGCCAAAGTGACAAACAAGTGTTTCTTTGATGTAGAAATTGGGGGTGAAGCTGCTGGAAGGGTTGTTTTTGGCCTATTTGGAGAGGAGAGAAAGGATATGGCTACAAAGGATGCTACTTCCATCGGAGGGGACTTCACTGAAGGAGATGGAACTGGTGGAATCAGTATCTATGGTGCTAAATTTGAAGATGAAAACTTTTCCTTGAAGCATGTTGGTCCTGGAGTTTTGAGCATGGCAAATGCCGGTCCTAATACCAATGGCAGTCAATTTTTTATCTGCACTGTACAGACTCCATGGTTAGACAATCGCCATGTTGTGTTTGGACATGTCATTGATGGATTGGATGTTGTGAAGACGCTTGAATCACAAGAGACAAGCAAGTTTGATAATAGCCCCCGAAAGTCGTGCAAAATTGCTAATTCTGGGGAACTGCCTTTAGATAGGCATGATCAGCACCAGGCACCAAATCTGAATGGCCCACCTGCCATCAGTGTGTTATTACTTCGTTTCAAAGCATATGATGCCCTCAAAACAATCTTCCAAACCCAATTTGTTGAGAACTTTAACTGCATGTGCGTGATCTGCGTTGGTGAATATCTGCAAATAACATTTTCAAGTCAAAGAATATTATGTAATGCTCTTCACTGA 927 0.4153 MTSSFSTQFVQIQNLPPRFHHHVQGNFSQDVSKVPRSHVVCSSTKSQLGYGKTLASRSHYAARFSVSQQSETKSITYRRMTCINAKENVVELQAKVTNKCFFDVEIGGEAAGRVVFGLFGEERKDMATKDATSIGGDFTEGDGTGGISIYGAKFEDENFSLKHVGPGVLSMANAGPNTNGSQFFICTVQTPWLDNRHVVFGHVIDGLDVVKTLESQETSKFDNSPRKSCKIANSGELPLDRHDQHQAPNLNGPPAISVLLLRFKAYDALKTIFQTQFVENFNCMCVICVGEYLQITFSSQRILCNALH 308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr17281g00002 308 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 94 236 IPR002130 GO:0000413|GO:0003755
Mupr17281g00002 308 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 129 237 - -
Mupr17281g00002 308 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 134 234 IPR002130 GO:0000413|GO:0003755
Mupr17281g00002 308 Gene3D - 125 239 IPR029000 -
Mupr17281g00002 308 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 182 194 IPR002130 GO:0000413|GO:0003755
Mupr17281g00002 308 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 195 210 IPR002130 GO:0000413|GO:0003755
Mupr17281g00002 308 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 167 182 IPR002130 GO:0000413|GO:0003755
Mupr17281g00002 308 SUPERFAMILY Cyclophilin-like 92 237 IPR029000 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr17281g00002 Mupr-Chr17281 8736 12821 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr17281g00002 135 226 U-box Gene Family AT5G67530 50.538 9.16e-17 79.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr17281g00002 K03768 - gmx:100526955 387.497