Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr17269g00001 ATGGCAATTGCAGCGGCAAACTCATCACCCACCATGAGCCTGAGTCATAGCCAGAGCCAAGAGGATGCAGGCACCACCACCTCCACAAACAACAACGACAACAACAATAACAACAACAACAAGCTGGATGATCACGAGCACGACATGGTGATGCCCGGTTTTCGCTTCCACCCAACTGAAGAAGAGCTCGTGGAATTCTACCTTCGCCGTAAGGTGGAGGGAAAGCGTTTCAACGTTGAGCTCATTACTTTCCTCGATCTTTATCGCTATGACCCTTGGGAGCTTCCCGCCTTGGCAGCTATTGGCGAGAAGGAATGGTACTTCTATGTGCCGAGAGATAGAAAGTATCGGAACGGTGATCGTCCCAATCGTGTCACTACCTCTGGGTATTGGAAGGCAACAGGAGCTGATAGGATGATCCGAACCGAGAATTTTCGCTCTATCGGCCTCAAGAAAACCCTAGTTTTCTATTCTGGTAAAGCTCCTAAAGGAATCCGAACCAGTTGGATTATGAACGAGTATCGCTTGCCGCAACATGAAACTGAACGATATCAAAAGGCTGAGATATCACTTTGCCGAGTGTACAAGAGAGCTGGAGTAGAGGACCATCCCTCCCTCCCTCGTTGTCTCCCAACAAGGCCATCCTCATCATCAAGAGCTGCTTCGAATTCTTCACACCCTGAAAATAAGAAGCACAATGAAATGCTTCACCACAACATGGCATTCATGGGACAAACAAAGCCAACTGAACACATAGTTGAGAAAATGAATGAAACGGAAGCAAGCAGTGATGTGAACACAGCTCTTGGTCTTTCCAAATACAATGCATACCGTGCTGCAATGGGTGCACTGAGCACCACAATGGACGAGGAAGGGTTGATGATGATGCAGCAGCCTAAGCCAGCAAGTGCTCCGCTTGGTATTAGCACAATCTTCTCTGCTAGTGCTGGCCCTTCTAGTTCCAACAATGGAATAGTGAATATGGATGAACTCAATAGGCTAATGAGTTACCAACATCAGTACTACAATGTTCAAAGCCATCCCAATCAGTTCTCCACTTTGCTGATGCAACAACCATCGCCGCTAGTGTCTCTCAACTCGCTGCCAAATCCACTTCCAACCACCTTTTCTGACCGACTCTGGGAGTGGAATCCAATTCCTGAGCCACCAAATCAAGAGTACAGCAACATGTCCTTCAAGTAA 1203 0.4746 MAIAAANSSPTMSLSHSQSQEDAGTTTSTNNNDNNNNNNNKLDDHEHDMVMPGFRFHPTEEELVEFYLRRKVEGKRFNVELITFLDLYRYDPWELPALAAIGEKEWYFYVPRDRKYRNGDRPNRVTTSGYWKATGADRMIRTENFRSIGLKKTLVFYSGKAPKGIRTSWIMNEYRLPQHETERYQKAEISLCRVYKRAGVEDHPSLPRCLPTRPSSSSRAASNSSHPENKKHNEMLHHNMAFMGQTKPTEHIVEKMNETEASSDVNTALGLSKYNAYRAAMGALSTTMDEEGLMMMQQPKPASAPLGISTIFSASAGPSSSNNGIVNMDELNRLMSYQHQYYNVQSHPNQFSTLLMQQPSPLVSLNSLPNPLPTTFSDRLWEWNPIPEPPNQEYSNMSFK 400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr17269g00001 400 MobiDBLite consensus disorder prediction 203 231 - -
Mupr17269g00001 400 Gene3D NAC domain 59 200 IPR036093 GO:0003677|GO:0006355
Mupr17269g00001 400 SUPERFAMILY NAC domain 50 196 IPR036093 GO:0003677|GO:0006355
Mupr17269g00001 400 MobiDBLite consensus disorder prediction 1 47 - -
Mupr17269g00001 400 ProSiteProfiles NAC domain profile. 50 197 IPR003441 GO:0003677|GO:0006355
Mupr17269g00001 400 MobiDBLite consensus disorder prediction 210 224 - -
Mupr17269g00001 400 MobiDBLite consensus disorder prediction 1 38 - -
Mupr17269g00001 400 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 47 257 - -
Mupr17269g00001 400 FunFam NAC domain-containing protein 35 59 200 - -
Mupr17269g00001 400 Pfam No apical meristem (NAM) protein 52 176 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr17269g00001 Mupr-Chr17269 1595 3693 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr17269g00001 49 221 NAC Transcription Factor Family AT2G02450 88.202 3.07e-114 338
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Mupr17269g00001 NAM 4e-34 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr17269g00001 - - gmx:100792622 634.024