Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr17268g00001 ATGGAACCTCGGGTTGGGAACAAGTTCCGTCTTGGTCGCAAGATTGGTAGCGGATCCTTCGGCGAGATCTATCTCGGTACGAATATCCAGACGAATGAAGAGGTTGCAATTAAGCTCGAAAATGTCAAAACCAAGCATCCTCAACTGTTGTATGAATCAAAGTTGTATAAAATACTGCAAGGAGGAACTGGGATCCCAAATGTGAGATGGTTTGGTGTTGAAGGAGATTACAATGTCCTAGTGATGGATTTACTGGGCCCTAGTCTTGAGGATTTGTTCAATTTCTGTACTCGGAAATTGTCCCTCAAAACTGTTCTCATGCTTGCTGATCAGATGATAAATCGAGTTGAGTATATTCATTCCAAATCATTTTTACATAGGGACATCAAGCCAGACAACTTCCTAATGGGATTGGGGAGGCGTGCAAATCAAGTTTATGCCATTGACTTTGGTCTTGCTAAGAAATACAGAGACACCTCTACCCATCAACATATTCCTTACAGAGAGAATAAGAATTTGACTGGAACTGCTAGATACGCTAGTATGAATACTCATCTTGGAATTGAGCAAAGCCGTAGAGACGACTTAGAATCACTTGGATATGTTCTTATTCTTCCATGGCAGGGATTGAAAGCAGGTACTAAGAAGCAGAAGTATGAGAAAATCAGTGAGAAGAAAGTTTCTACTTCTATTGAGTCTTTGTGTCGTGGCTACCCCTCAGAATTTGCTTCATACTTCCATTACTGCCGGTCACTGAGGTTCGATGATAAACCAGATTATGCTTATTTGAAAAGGCTTTTCCGTGACCTTTTCATTTATGAAGGATTCCAGTTTGATTATGTCTTTGATTGGACCATTTTGAAATATCAGCAATCTCAAATTGCCACACCTCCTACTCGTGCCATTGGTCCTGCTGCTGGACCAAGTTCTGGGGTGCCACCAGCTGTTGTAAATGCTGATAGACAGACAGGTGGGGAAAACGGTAGGCATACTGGTTGGTCTTCATCTGATCCTTCTCGAAGAAGAAACTCTGGACCTATTGCAAATGATGGAAACTTATCAAGACAAAAAGCCCCAGTTCCAAGTGACTCAACTGGATCTAAAGATGTTATGTTGTCTAGTTCTAATTTGTTCCGGTCAAGTGGATCTACAAGGCGAGGTGGTGTATCCAGCAGTCGTGATGCAGTTGCTGGCAATGAGAGTGAGCCCTCTCATCCTCTCACCATGGGCATGGATGCTGCTAGTCCAGCACTCCGTAAAATCTCTGCTGCTCAAAGAAGTTCCCCTATCATGTCATTTGAGCACAACCGAACATCCTCTGGCAGAAATACATCAAACATGAAGAACTTTGAGTCAACTCTCCGAGGTATTGAGAGCCTGAATTTCAACGAGGAG 1395 0.4287 MEPRVGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKHPQLLYESKLYKILQGGTGIPNVRWFGVEGDYNVLVMDLLGPSLEDLFNFCTRKLSLKTVLMLADQMINRVEYIHSKSFLHRDIKPDNFLMGLGRRANQVYAIDFGLAKKYRDTSTHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLILPWQGLKAGTKKQKYEKISEKKVSTSIESLCRGYPSEFASYFHYCRSLRFDDKPDYAYLKRLFRDLFIYEGFQFDYVFDWTILKYQQSQIATPPTRAIGPAAGPSSGVPPAVVNADRQTGGENGRHTGWSSSDPSRRRNSGPIANDGNLSRQKAPVPSDSTGSKDVMLSSSNLFRSSGSTRRGGVSSSRDAVAGNESEPSHPLTMGMDAASPALRKISAAQRSSPIMSFEHNRTSSGRNTSNMKNFESTLRGIESLNFNEE 465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr17268g00001 465 SUPERFAMILY Protein kinase-like (PK-like) 5 284 IPR011009 -
Mupr17268g00001 465 SMART serkin_6 9 281 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr17268g00001 465 FunFam Casein kinase I isoform delta-like 1 302 - -
Mupr17268g00001 465 Gene3D Transferase(Phosphotransferase) domain 1 1 302 - -
Mupr17268g00001 465 Pfam Protein kinase domain 10 203 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr17268g00001 465 PANTHER CASEIN KINASE-RELATED 9 372 - -
Mupr17268g00001 465 CDD STKc_CK1_delta_epsilon 8 276 - -
Mupr17268g00001 465 ProSiteProfiles Protein kinase domain profile. 9 272 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr17268g00001 465 ProSitePatterns Serine/Threonine protein kinases active-site signature. 124 136 IPR008271 GO:0004672|GO:0006468
Mupr17268g00001 465 FunFam Putative Casein kinase I 1 85 - -
Mupr17268g00001 465 MobiDBLite consensus disorder prediction 299 408 - -
Mupr17268g00001 465 MobiDBLite consensus disorder prediction 424 465 - -
Mupr17268g00001 465 MobiDBLite consensus disorder prediction 324 398 - -
Mupr17268g00001 465 ProSitePatterns Protein kinases ATP-binding region signature. 15 38 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr17268g00001 Mupr-Chr17268 3668 8174 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr17268g00001 7 181 EF-hand Containing Proteins AT2G17890 28.022 6.05e-13 68.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1 Mupr17268g00001 Pkinase 8.2e-24 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr17268g00001 K02218 - gmx:100778165 828.935