Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr17262g00001 ATGGAGCAACAGAGCCGTACGGACACGGATCAGTTTTTGACTCTGGGACCCACACCGAACGAGCCACACACTCCCAAAGAAGCAGTGGCGCATGTCAATACCGAGAATAACAACGTTGTTAGCGCCATTAACGTTGGTGTTGGTTCTGGTTCGGAACTGACTGTAGCAAAGTCCGAGGCTGTAGGTTCGGGGCAGGGGGTGAAGAGAGGGAGGGGAAGGCCTCGTAAGTATGATGTTGTTGCGGTGTCTTCGGCGGCGGTGCCGCCGGGATTTTCCGATCAGGCCAAGAGAGGCAGAGGACGACCTCGTGGTTCTGGAAAACTGCAGATTCTAGCTTCCATTGGTGAGTTTTCTGGTGGTTATGTTGCAGAAACAGCTGGGGGAAGCTTCATACCTCACGTGCTGACTGTGAACACTGGGGAGGATATGGTGAGCAAAATAATGTCATTTTTTGACAAAGGCCCTCGAGCAGTTTGCATACTTTCTGCTACTGGTACTGTTTCAAGTGTGTCCATTCGCCAACCTATTGCTACTGGTCAAGGTGTTTTGAGATACGAGGGCCTCTTTGAGATATTATCTTTATCTGGATCATGTACCTACACTAGTGGCGCTATGGGTCCAGTTCGTAAAATTGACTTGTTGAGCATTTTATTGGCTAAACCTGATGGGAGGGTTTTTGGAGGTATCGTTGAGAGCTCATTGGTAGCAGCTTGCCCTATTCAACTTGTTATGGCCTCTTTCAAGCAAAACATCAGTAACCAAATCAAGAGAAAACAATTGTCTGAATCTTCTGATGCTATCATTATGCCGAGTAATTCAGATTCAGAAAGGGATCAACTTAAACTTCCAAAATTGGCAGAAGGTGAGCAGAGTTGTCCTTCACCACCAGCAACAGGACCTGAGCCAACAACAACAACTAATGGTGTGGCAGATAATGTCTTTCCTGTCACATCCAATGGAGTGTCAGATAATGTTATTCCTCCAGATCAAAATTTGCACTCTGCCTCTGTTAATGGTGTTGACTTGGACAGCCAGACCCCGCAGCCAGTAACAGATCAAAGAACTTCTGCAGATGTGAATGCTAGTGTCATACACTCATTGCTACATCTCAATTAA 1116 0.4659 MEQQSRTDTDQFLTLGPTPNEPHTPKEAVAHVNTENNNVVSAINVGVGSGSELTVAKSEAVGSGQGVKRGRGRPRKYDVVAVSSAAVPPGFSDQAKRGRGRPRGSGKLQILASIGEFSGGYVAETAGGSFIPHVLTVNTGEDMVSKIMSFFDKGPRAVCILSATGTVSSVSIRQPIATGQGVLRYEGLFEILSLSGSCTYTSGAMGPVRKIDLLSILLAKPDGRVFGGIVESSLVAACPIQLVMASFKQNISNQIKRKQLSESSDAIIMPSNSDSERDQLKLPKLAEGEQSCPSPPATGPEPTTTTNGVADNVFPVTSNGVSDNVIPPDQNLHSASVNGVDLDSQTPQPVTDQRTSADVNASVIHSLLHLN 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr17262g00001 371 MobiDBLite consensus disorder prediction 1 26 - -
Mupr17262g00001 371 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 37 300 IPR039605 GO:0003680
Mupr17262g00001 371 CDD DUF296 132 247 IPR005175 -
Mupr17262g00001 371 SMART AT_hook_2 96 108 IPR017956 GO:0003677
Mupr17262g00001 371 SMART AT_hook_2 68 80 IPR017956 GO:0003677
Mupr17262g00001 371 Pfam Plants and Prokaryotes Conserved (PCC) domain 132 248 IPR005175 -
Mupr17262g00001 371 MobiDBLite consensus disorder prediction 1 18 - -
Mupr17262g00001 371 Gene3D - 132 264 - -
Mupr17262g00001 371 PRINTS AT-hook-like domain signature 94 105 IPR017956 GO:0003677
Mupr17262g00001 371 PRINTS AT-hook-like domain signature 68 78 IPR017956 GO:0003677
Mupr17262g00001 371 MobiDBLite consensus disorder prediction 286 357 - -
Mupr17262g00001 371 SUPERFAMILY AF0104/ALDC/Ptd012-like 129 254 - -
Mupr17262g00001 371 ProSiteProfiles PPC domain profile profile. 127 268 IPR005175 -
Mupr17262g00001 371 MobiDBLite consensus disorder prediction 301 357 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr17262g00001 Mupr-Chr17262 1700 5953 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr17262g00001 67 259 AT-hook Motif Nuclear Localized (AHL) Family AT3G61310 46.734 1.85e-41 147
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr17262g00001 - - gsj:114378162 451.44