Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr17256g00001 ATGGAAACAGAAAGACAGAGACACGCAGGAGAGAGTCCTCCAAGTCCAAGCAGCCCATTGAAGAAGAAAGAGGTATCTGTGGAGGAAGAAGAAGCAGAAACTTTATTGGACCTAAATGCCCCTGCCCATGATTCTTCTATTGGGGTGAATCTCATGACCTGTTTGGAGGCGGAATTGTCGTCAGAAACCCCACACGGATCAGAACCGCGAGTGTTCTCTTGCAACTACTGCCAGAGAAAGTTCTACAGTTCGCAAGCTCTCGGGGGACACCAAAACGCCCACAAGAGAGAGAGGTCCGTTGCAAAGAGAGGTCACAGGCGCGTGATGGCCTCAGCAACACCTTTTGGGATTCCCTTTCTCCGTAACCAACTTCCCCACTATGCCACTATGGCGTCTCTGCCTCTCCACGGTTCTTGTGGTAATAAACCTCTCGGAATTCAGGCTCACTCTTTGATTCACAAACCTTCTTCTTCTTCTTCTCATTTTTTCGGACATCATGGGTGGTCGAGGTCAAGACCTCTCATTGATCAACAACCTGGGATAGGGAAGCTAACGATGGAAACTTGTCACAGAACATCACGAGGCAGTGTTGGGAGATTCGATGCGGTGAGGACCACTCTCAATGAAGAAACTAGTGGATATTTGTGCACGGGTGAATTATAA 663 0.4857 METERQRHAGESPPSPSSPLKKKEVSVEEEEAETLLDLNAPAHDSSIGVNLMTCLEAELSSETPHGSEPRVFSCNYCQRKFYSSQALGGHQNAHKRERSVAKRGHRRVMASATPFGIPFLRNQLPHYATMASLPLHGSCGNKPLGIQAHSLIHKPSSSSSHFFGHHGWSRSRPLIDQQPGIGKLTMETCHRTSRGSVGRFDAVRTTLNEETSGYLCTGEL 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr17256g00001 220 Gene3D Classic Zinc Finger 54 114 - -
Mupr17256g00001 220 PANTHER C2H2 AND C2HC ZINC FINGERS SUPERFAMILY PROTEIN 21 196 IPR044246 GO:0009788
Mupr17256g00001 220 SUPERFAMILY beta-beta-alpha zinc fingers 69 99 IPR036236 -
Mupr17256g00001 220 ProSitePatterns Zinc finger C2H2 type domain signature. 74 94 IPR013087 -
Mupr17256g00001 220 ProSiteProfiles Zinc finger C2H2 type domain profile. 72 99 IPR013087 -
Mupr17256g00001 220 MobiDBLite consensus disorder prediction 1 30 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr17256g00001 Mupr-Chr17256 6289 7233 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr17256g00001 36 219 C2H2 Transcription Factor Family AT5G10970 44.660 2.75e-41 139
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Mupr17256g00001 None None None