Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr17250g00001 ATGAATATGGTGTCAACTCTGTTCATCGGAAAGCCGCCGGCGACGGTGGACCTAGACCGGATGCCTGAGCGCGGGTCCCACCACCGGCGCTCCCACTCCGACACCTCGTTCCGCTTCGCCGCCAACTTCGACGACCTTCTCCTCTTCGACGCCTCCGACCTCGACATCTCCAACCTCCCTTCGCCGCTCCCGCCTCCGTCGCCGGTCTCCGCCGGCGTCGTTCCGATGGCCGTCGACTCCGACGAGTCCGGCGGGCGCCCGAGGCCAGCGGGGGCGCCCGCCAGCGGGCACCTGCGGAGCCTGTCGGTGGACTCCGACTTCTTCGACGGGCTCGGGCTCGGCGGCGGTGACGAGAGAGGCGCCGGGAAAGGCAGCGGCGAGCGGAGGGCGGGGCACCACCGGCACAGCAACTCGATGGACGGGTCATCCACGACGTCGTTTGAGGCGGACTCGGTGATGATGGACGGTGTGAAGAAAGCTATGGCGCCTGATAAACTCGCTGAGCTTGCTCTTATGGATCCTAAGAGAGCTAAGAGGATTCTTGCTAATAGGCAATCTGCTGCTAGATCAAAGGAGAGGAAGGTTCGTTACACAAGTGAGTTGGAGAGGAAGGTGCAGACACTTCAGACTGAAGCTACTAACCTTTCTGCACAGCTTACCATGCTTCAGAGAGACACTACTGATTTGACTGCAGAGAATAAGGAGCTCAAACTGCGTTTAGAGGCTTTGGAGCAAGAAGCACAGCTTAGAGAAGATCTCAATGAGGCATTGAAGGAAGAACTGCAGCGCCTTAGGGCACAAAGTAGCCGATTGGGTGCTATTGCTGGCAACCCTTCTTTTGGTGGAATATTCAACCAGTTGGCTTCGCAGTTAGCCATGCAACAGTTGACTAATTCTGCGCCCCAGCAGGCACAACACCAGCCACAGGGTGGCATACCACTTCCACCCTCTGGACAGAACCACCCTAACTTCATGGACTTCAATCAGAAGAAGTAG 996 0.5803 MNMVSTLFIGKPPATVDLDRMPERGSHHRRSHSDTSFRFAANFDDLLLFDASDLDISNLPSPLPPPSPVSAGVVPMAVDSDESGGRPRPAGAPASGHLRSLSVDSDFFDGLGLGGGDERGAGKGSGERRAGHHRHSNSMDGSSTTSFEADSVMMDGVKKAMAPDKLAELALMDPKRAKRILANRQSAARSKERKVRYTSELERKVQTLQTEATNLSAQLTMLQRDTTDLTAENKELKLRLEALEQEAQLREDLNEALKEELQRLRAQSSRLGAIAGNPSFGGIFNQLASQLAMQQLTNSAPQQAQHQPQGGIPLPPSGQNHPNFMDFNQKK 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr17250g00001 331 Pfam bZIP transcription factor 175 233 IPR004827 GO:0003700|GO:0006355
Mupr17250g00001 331 MobiDBLite consensus disorder prediction 17 33 - -
Mupr17250g00001 331 MobiDBLite consensus disorder prediction 112 145 - -
Mupr17250g00001 331 MobiDBLite consensus disorder prediction 14 33 - -
Mupr17250g00001 331 Coils Coil 198 274 - -
Mupr17250g00001 331 CDD bZIP_plant_RF2 176 225 IPR044759 GO:0003700|GO:0006355
Mupr17250g00001 331 MobiDBLite consensus disorder prediction 60 99 - -
Mupr17250g00001 331 FunFam Transcription factor VIP1 174 227 - -
Mupr17250g00001 331 SUPERFAMILY Leucine zipper domain 175 227 IPR046347 GO:0003700|GO:0006355
Mupr17250g00001 331 Gene3D - 175 227 - -
Mupr17250g00001 331 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 173 236 IPR004827 GO:0003700|GO:0006355
Mupr17250g00001 331 MobiDBLite consensus disorder prediction 295 331 - -
Mupr17250g00001 331 MobiDBLite consensus disorder prediction 121 136 - -
Mupr17250g00001 331 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 15 307 - -
Mupr17250g00001 331 SMART brlzneu 171 235 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr17250g00001 Mupr-Chr17250 4715 9882 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr17250g00001 12 330 bZIP Transcription Factor Family AT1G43700 47.701 7.08e-80 245
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Mupr17250g00001 bZIP_1 5.7e-08 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr17250g00001 K20557 - gmx:778142 481.87