Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr17246g00001 ATGCAAAGCTTCAACACAACCGAATCAGAATCAACCTCACCACTCTATTGCCATTCTTCCTTCTTTCACCGGGGAAATGACACCAGCCGAAATCCCACGCGTTTCTCGGATCTTCAACATTCTTTTCGACAACACCATGCCGTTGATTTAAGCTCAAGCTCTGTGTTTGGTGCAAAGTCGAGCAATGTCGCTGTTGTTGCAAGCAACTTGCAGTGTGGGACATTCAACACGAACCTTGGGTGTGCAGAATTTGCTTCTACAGTTGCAGGGTGTATTGAGACAGAGCAGCAAACCATGTTCCAGAGAGGAACCACTAACGCCACCGTGCCCCTATCGAACCCGCATGTTGAGAATTGGGCAGATGATAGCCAACACACTGAAGATACTTGCACAGATATCGATACTGATGACAGAAACCAATGTTTCTCAACCGTGTCTTGGGGTAATGGAGTTGGAGACGGGGCACTTGTAGTTGTGGACTCCCAGGATCAAAGTAAATCTAAGGTTAAAGCTGAAAACCAGAAGACTATACGTAGGCTAGCTCAGAATCGGGAGGCTGCAAGGAAGAGTCGGTTGAGGAAAAAGGCATATGTGCAACAATTGGAGAATAGTCGAGTTAGGCTTGCACAATTAGAGCAAGAGCTTCAACGGGCACGTCAACAGGGTGCATTTATTGCAACTGGAATCACTGGGGATCGTGGTCATTCAATTGTTGGAAATGGTGCGTTGGCTTTTGACATGGACTATGCCCGTTGGGTTGATGAGCATCAACGGCTTATCAATGACATAAGATCAGCTATAAATTCTCAAATGGGTGATAGTGAACTACATCTTCTTGTTGATGGAGTCATGGCACATTATGATGAATTATTTAGGTTAAAGAGCATAGGGGCAAAGGCTGATGTATTTCACATACTTTCTGGGATGTGGAAGACACCTGCAGAAAGGTGCTTCATATGGCTCGGTGGATTTCGTTCATCTGAACTTCTCAAGATAGTTAGAAACCAGCTTGAGCCGTTGACCGAACAGCAATTGATGGGCATTTACAATCTGCAGCAGTCTTCCCAGCAGGCTGAGGATGCATTATCACAAGGCATGGAAGCATTGCAGCAGTCTCTTTCAGAGACACTTTCCTCCTCCTCCCTAGGGCCCTCTGGTTCTGGAAATGTTGCTGAGTACATGGGCCAAATGGCAATTGCTTTGGGCAAGCTTGCCACACTAGAGAGTTTCCTTCATCAGGCTGATCTCTTGAGGCAACAAACACTACAACAGATGCGCCGAATTTTGACAACGTTCCAAGCTGCTCGTGCTCTCCTTGTCATGAATGATTACGTTTCACGACTTAGAGCTCTTAATTCATTATGGTTAGCGTGCCCTAGAGAGTACTAG 1389 0.46 MQSFNTTESESTSPLYCHSSFFHRGNDTSRNPTRFSDLQHSFRQHHAVDLSSSSVFGAKSSNVAVVASNLQCGTFNTNLGCAEFASTVAGCIETEQQTMFQRGTTNATVPLSNPHVENWADDSQHTEDTCTDIDTDDRNQCFSTVSWGNGVGDGALVVVDSQDQSKSKVKAENQKTIRRLAQNREAARKSRLRKKAYVQQLENSRVRLAQLEQELQRARQQGAFIATGITGDRGHSIVGNGALAFDMDYARWVDEHQRLINDIRSAINSQMGDSELHLLVDGVMAHYDELFRLKSIGAKADVFHILSGMWKTPAERCFIWLGGFRSSELLKIVRNQLEPLTEQQLMGIYNLQQSSQQAEDALSQGMEALQQSLSETLSSSSLGPSGSGNVAEYMGQMAIALGKLATLESFLHQADLLRQQTLQQMRRILTTFQAARALLVMNDYVSRLRALNSLWLACPREY 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr17246g00001 462 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 173 217 IPR004827 GO:0003700|GO:0006355
Mupr17246g00001 462 SMART brlzneu 171 242 IPR004827 GO:0003700|GO:0006355
Mupr17246g00001 462 CDD bZIP_HBP1b-like 175 227 - -
Mupr17246g00001 462 ProSiteProfiles DOG1 domain profile. 242 458 IPR025422 GO:0006351|GO:0043565
Mupr17246g00001 462 Pfam Seed dormancy control 260 334 IPR025422 GO:0006351|GO:0043565
Mupr17246g00001 462 Gene3D - 173 224 - -
Mupr17246g00001 462 Coils Coil 194 221 - -
Mupr17246g00001 462 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 178 193 IPR004827 GO:0003700|GO:0006355
Mupr17246g00001 462 FunFam BZIP family transcription factor 174 223 - -
Mupr17246g00001 462 Pfam bZIP transcription factor 173 214 IPR004827 GO:0003700|GO:0006355
Mupr17246g00001 462 SUPERFAMILY Leucine zipper domain 175 218 IPR046347 GO:0003700|GO:0006355
Mupr17246g00001 462 PANTHER TRANSCRIPTION FACTOR TGA9 107 461 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr17246g00001 Mupr-Chr17246 999 5733 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr17246g00001 12 461 bZIP Transcription Factor Family AT1G68640 55.484 7.46e-160 458
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Mupr17246g00001 DOG1 4e-29 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr17246g00001 K14431 - gmx:100775783 768.844