Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr17221g00001 ATGTCCTTGCTAACGGTGGCGCATCAACGGGGGTCAGGCGAGTTTATCCGGTTCACGGCGGATAGTGGTGGTGGCAGCGGCAACGGTGACGGTGAATATGATTATGGACATGGACATGATGAAGGTGGTGGTGGTGGAGGTGGTTCACTAGGATTGAATTTCAACCAATTGATGCAACAAGGTGAGGTGACAATGCAAGGTGGTTCTTTGGTTTCAGGATACAACAGGGGTGATCCAGAGTTGAGAGAGATTGTTTCAGCTTTGACACACGTGGTGTCATCAGGGTCTGGCCAGAGGAGCACCGATTGGATCCAACAGAGTGGTTTTCCTATGATGTCTGGTTTTGGACATGCACCTTCTTCTCTTTCACGTTTGTCTTCTTTCCCTTCTTCTTCCCCCTCTTGGGTTGGCCACAAAAGAGGGAGAGAAGAAGAAGAGAGTAGCTCTTCCCATAACTTGATGCAACAACCACAACAAAGTGCTCCAAGACTCTTCAGAACAATTGGTGACTTCATGGTGCCTTCTCAAGGAGACTCATCTTCAGTGAATGAAGAGCCCCCCATCTCCACAGCAACCACTACTGTAACCGTCGCTACAGCGACCGTTACTGAAGCCACTGCAGCGGCTACTGAAGCCACCACAGGAGGTGGGGAAAGGAGGAGAAAGTACAGGGGAGTGAGGCAGAGGCCATGGGGGAAATGGGCAGCAGAAATCCGTGATCCACACAAAGCAGCAAGAGTTTGGCTTGGCACATTCGACACTGAAGAAGCAGCAGCAAGAGCCTATGATGAAGCTGCATTGAGATTCAGAGGCAACAGGGCAAAACTTAACTTCCCTGAAAATGTTAGAGCAATTCCACCTCTTCAGCCTTTTCCTGCCACCACTAGACTAACCGTTTCTGATTCCCCCACCACTCAATTCCGCCCTCTCGCGGCGGTGGCGCCGCCGCCATCCTTCAATCAACCACCACAGATTCAGGGCTCCTCTGACTTGATCAGAGACTACTTGCAATACTCTCAGCTTCTACAGAGTGACTTTCAACATCAACATCAACAACAACAACAACCACCTTCTAGTTTGCTTCAGCAGTTGTACTACAATACTCAATTGGCTACACTTCAGTCACCTTCATTATTACCATCATCTCCTTCATTGTCTTCTTCTGTGTCACCAACACCTTTTCCATTATTCTCAACATCTGCCCAATTTTCCTCTGCTTCATTTCCCATGTTTTCAACTCAACATATGGCCTATTTCCAGCCACCAGAAAACCGCCCTCCCGCCTCCGGCCGACCGGAGTTTCCGCCGTCAACGTGGTCGGATACCAGCGGCCATCCACCACCTTCTGGTTGA 1353 0.4974 MSLLTVAHQRGSGEFIRFTADSGGGSGNGDGEYDYGHGHDEGGGGGGGSLGLNFNQLMQQGEVTMQGGSLVSGYNRGDPELREIVSALTHVVSSGSGQRSTDWIQQSGFPMMSGFGHAPSSLSRLSSFPSSSPSWVGHKRGREEEESSSSHNLMQQPQQSAPRLFRTIGDFMVPSQGDSSSVNEEPPISTATTTVTVATATVTEATAAATEATTGGGERRRKYRGVRQRPWGKWAAEIRDPHKAARVWLGTFDTEEAAARAYDEAALRFRGNRAKLNFPENVRAIPPLQPFPATTRLTVSDSPTTQFRPLAAVAPPPSFNQPPQIQGSSDLIRDYLQYSQLLQSDFQHQHQQQQQPPSSLLQQLYYNTQLATLQSPSLLPSSPSLSSSVSPTPFPLFSTSAQFSSASFPMFSTQHMAYFQPPENRPPASGRPEFPPSTWSDTSGHPPPSG 450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr17221g00001 450 FunFam Ethylene-responsive transcription factor 2 221 280 - -
Mupr17221g00001 450 Pfam AP2 domain 222 271 IPR001471 GO:0003700|GO:0006355
Mupr17221g00001 450 PRINTS Ethylene responsive element binding protein signature 245 261 IPR001471 GO:0003700|GO:0006355
Mupr17221g00001 450 PRINTS Ethylene responsive element binding protein signature 223 234 IPR001471 GO:0003700|GO:0006355
Mupr17221g00001 450 Gene3D AP2/ERF domain 221 281 IPR036955 GO:0003700|GO:0006355
Mupr17221g00001 450 MobiDBLite consensus disorder prediction 119 134 - -
Mupr17221g00001 450 CDD AP2 222 281 IPR001471 GO:0003700|GO:0006355
Mupr17221g00001 450 SMART rav1_2 222 285 IPR001471 GO:0003700|GO:0006355
Mupr17221g00001 450 MobiDBLite consensus disorder prediction 18 49 - -
Mupr17221g00001 450 ProSiteProfiles AP2/ERF domain profile. 222 279 IPR001471 GO:0003700|GO:0006355
Mupr17221g00001 450 MobiDBLite consensus disorder prediction 435 450 - -
Mupr17221g00001 450 PANTHER DNA-BINDING DOMAIN 160 349 IPR044808 GO:0003700|GO:0009873
Mupr17221g00001 450 MobiDBLite consensus disorder prediction 118 160 - -
Mupr17221g00001 450 SUPERFAMILY DNA-binding domain 222 280 IPR016177 GO:0003677
Mupr17221g00001 450 MobiDBLite consensus disorder prediction 417 450 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr17221g00001 Mupr-Chr17221 3955 5906 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr17221g00001 219 295 AP2-EREBP Transcription Factor Family AT2G33710 74.359 6.08e-34 125
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Mupr17221g00001 AP2 3.4e-15 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr17221g00001 - - gmx:100804843 551.592