Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr17219g00003 TGTGTGTTAAGCTTATATTTGACAAATTGTCTGCATTCTGTATTTGCCTATGAAACGCAGGGAATCGATCTGAAGGCTGGGGGTAAGAGCAAAAAGACCAAAAGAACAGCACCAAAGTCCAATGACATCTACCTCAAACTACTTGTCAAGCTTTATCGCTTCCTTGTACGAAGGACTCACAGCAATTTCAATGCTGTGATACTCAAGCGCTTGTTAATGAGCAATGTTAACAAGCCTCCGCTTTCTTTGTCAAAGTTAATTAAGTATACAAAGGAGGAGAAGGATAAAGTTGCTGTTATAGTGGGTACTGTAACTGATGATATCAGAGTACATGAAGTTCCACCAATGAGAGTTACAGCGCTCAAGTTTACACAGAGAGCACGTGCAAGAATAGAAAAGGCTGGCGGTAACTGCATGACATTTGATGAGCTTGCCCTATGGGCTCCTTTGGGACAGAATACGATCCTTCTTAGAGGCCCCAAGAATGCTCGGGAAGCTGTGAAACACTTTGGTCCTGCTCCTGGTGTGCCCCACAGCCATTCCAAGCCCTATGTACGAGCTAAGGGAAGAAAGTTCGAGAGGGCTAGAGGAAGGAGGAACAGCAGGGGATTTAGGGATTTTCAGTATATTTGTTGGCTTTTACATTGCCGTGTAATACGAAAGTCTCATTTGATGCCCCCTTAT 684 0.4386 CVLSLYLTNCLHSVFAYETQGIDLKAGGKSKKTKRTAPKSNDIYLKLLVKLYRFLVRRTHSNFNAVILKRLLMSNVNKPPLSLSKLIKYTKEEKDKVAVIVGTVTDDIRVHEVPPMRVTALKFTQRARARIEKAGGNCMTFDELALWAPLGQNTILLRGPKNAREAVKHFGPAPGVPHSHSKPYVRAKGRKFERARGRRNSRGFRDFQYICWLLHCRVIRKSHLMPPY 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr17219g00003 228 FunFam 60S ribosomal protein L18 20 206 - -
Mupr17219g00003 228 Pfam Ribosomal protein 60S L18 and 50S L18e 21 205 IPR021131 -
Mupr17219g00003 228 SUPERFAMILY Ribosomal proteins L15p and L18e 39 158 IPR036227 -
Mupr17219g00003 228 PANTHER 60S RIBOSOMAL PROTEIN L18 21 205 IPR000039 GO:0003735|GO:0005840|GO:0006412
Mupr17219g00003 228 Gene3D - 20 206 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr17219g00003 Mupr-Chr17219 16600 18536 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr17219g00003 22 205 Cytoplasmic Ribosomal Protein Gene Family AT2G47570 71.892 7.54e-94 271
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr17219g00003 K02883 - gmx:100527681 329.331