Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr1720g00008 ATGAGGCCAATTTTGATGAAAGGTCATGAGAGGCCACTTACGTTCCTCAAATACAACAGGGACGGTGATCTCCTCTTCTCCTGCGCTAAGGACCACAACCCTACTGTGTGGTTTGCCGACAATGGCGAACGCTTGGGCACTTATCGTGGCCATAATGGTGCTGTTTGGTGCTGCGATCATTGTGGCTCCCCATCAATTTCAATTTTGCTTTTGATACTGATGGTTAATGATAATGCAGGAGATTCTGGTCGACTCATAACAGGAAGTGCGGATCAGAGCGCCAAGCTATGGAACGTGCAAACTGGTCAGCAATTGTTCACCTTCAATTTTGATTCCCCGGCCAGGTCGGTGGATTTTGCCGTTGGTGATAAGCTTGCCGTTATCACCACTGATCCCTTTATGGAATTGCCCTCTGCAATCCATGTCAAACGCATTGCTAAAGATCCAACTGAACAAACCGGTGAATCCGTGCTTCTCATTAAGGGTCCTCAGGGAAGAATAAATAGAGCTATTTGGGGACCCCTCAACAGAACCATTATTAGTTCCGGGGAAGATGCTGTTATTCGTATTTGGGATTCTGAGACGGGTAAATTGCTTAAAGAGTCGGACAAGGAATCTGGCCATAAAAAGACTGTAACATCACTTGCTAAGTCTGCGGATGGTTCACATTTCCTTACAGGCTCCCTTGATAAGTCTGCTAAGCTTTGGGATTCTAGGTCATTGACTCTTATCAAGACATATGTCACTGAACGCCCAGTCAATGCAGTTGCAATGTCTCCTCTTCTTGATCATGTGGTACTTGGAGGTGGTCAGGACGCATCAGCTGTTACAACTACTGATCATCGTGCTGGCAAATTTGAAGCCAAATTCTACGACAAGATTCTTCAAGAAGAAATTGGGGGTGTGAAAGGGCATTTTGGACCAATTAATGCATTGGCTTTTAACCCTGATGGAAAAAGTTTTTCAAGTGGAGGTGAAGACGGTTATGTACGGTTGCACCATTTCGATCCAGATTATTTCAACATTAAAATATAG 1035 0.4464 MRPILMKGHERPLTFLKYNRDGDLLFSCAKDHNPTVWFADNGERLGTYRGHNGAVWCCDHCGSPSISILLLILMVNDNAGDSGRLITGSADQSAKLWNVQTGQQLFTFNFDSPARSVDFAVGDKLAVITTDPFMELPSAIHVKRIAKDPTEQTGESVLLIKGPQGRINRAIWGPLNRTIISSGEDAVIRIWDSETGKLLKESDKESGHKKTVTSLAKSADGSHFLTGSLDKSAKLWDSRSLTLIKTYVTERPVNAVAMSPLLDHVVLGGGQDASAVTTTDHRAGKFEAKFYDKILQEEIGGVKGHFGPINALAFNPDGKSFSSGGEDGYVRLHHFDPDYFNIKI 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr1720g00008 344 ProSiteProfiles Trp-Asp (WD) repeats profile. 205 246 IPR001680 GO:0005515
Mupr1720g00008 344 ProSitePatterns Trp-Asp (WD) repeats signature. 179 193 IPR019775 -
Mupr1720g00008 344 Hamap Eukaryotic translation initiation factor 3 subunit I [EIF3I]. 1 344 IPR027525 GO:0003743|GO:0005737|GO:0005852
Mupr1720g00008 344 ProSiteProfiles Trp-Asp (WD) repeats profile. 160 201 IPR001680 GO:0005515
Mupr1720g00008 344 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 160 197 - -
Mupr1720g00008 344 Gene3D - 1 344 IPR015943 GO:0005515
Mupr1720g00008 344 ProSiteProfiles Trp-Asp (WD) repeats profile. 6 47 IPR001680 GO:0005515
Mupr1720g00008 344 CDD WD40 7 332 - -
Mupr1720g00008 344 Pfam WD domain, G-beta repeat 206 237 IPR001680 GO:0005515
Mupr1720g00008 344 Pfam WD domain, G-beta repeat 43 98 IPR001680 GO:0005515
Mupr1720g00008 344 Pfam WD domain, G-beta repeat 301 332 IPR001680 GO:0005515
Mupr1720g00008 344 SUPERFAMILY WD40 repeat-like 4 332 IPR036322 GO:0005515
Mupr1720g00008 344 SMART WD40_4 1 38 IPR001680 GO:0005515
Mupr1720g00008 344 SMART WD40_4 41 98 IPR001680 GO:0005515
Mupr1720g00008 344 SMART WD40_4 240 279 IPR001680 GO:0005515
Mupr1720g00008 344 SMART WD40_4 153 192 IPR001680 GO:0005515
Mupr1720g00008 344 SMART WD40_4 295 334 IPR001680 GO:0005515
Mupr1720g00008 344 SMART WD40_4 195 237 IPR001680 GO:0005515
Mupr1720g00008 344 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 205 240 - -
Mupr1720g00008 344 ProSiteProfiles Trp-Asp (WD) repeats profile. 81 107 IPR001680 GO:0005515
Mupr1720g00008 344 ProSiteProfiles Trp-Asp (WD) repeats profile. 302 332 IPR001680 GO:0005515
Mupr1720g00008 344 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT I 1 343 - -
Mupr1720g00008 344 PRINTS G protein beta WD-40 repeat signature 179 193 IPR020472 -
Mupr1720g00008 344 PRINTS G protein beta WD-40 repeat signature 224 238 IPR020472 -
Mupr1720g00008 344 PRINTS G protein beta WD-40 repeat signature 85 99 IPR020472 -
Mupr1720g00008 344 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 302 332 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr1720g00008 1 344 Eukaryotic Initiation Factors Gene Family AT2G46290 76.301 0.0 547
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr1720g00008 K03246 - gmx:100793485 640.573