Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr1720g00004 ATGTCGTCCACTCCTCCGCCGCATTCTCCGCTGAAACCCGACCAAGGCGATCCCGCGCCGATGAAACCGTCGCCGCTGGCCGGAAGAATTAAGCTCCAGAAGATTCCGCCGATTCCAATTCGACGGAGTAAGGTAGGATATGAAGAGCTGGAGGAAGAGGAAGAGGAAGATGAATGTGGCGATTCTTCCATCTTGCTCGCTTCGTCTCTAGGCCTGAATCACATTCGCACGCGCTCCTCATCTTCTCCTCTTCGCTATTCTTCCTCCGTTGGTGCTCCTTCCTTCCTCACACAAGATGCTGTCACTATCAACGAAGCCAGAGTTAGATCCAAACCTTCCCAGCCAAAAAAAGACATAGGGGGAAAAGTTCATTTAGGTCAATCCAAATCGCTGAGACCTCATTCACAACTCAACCCTGTGCTAGAGGGTCATCATGCAGCTTTCGCCAAAGAAATACAATCCCCACGTTTTCAGGAAATCCTGCGACTTACAAGTGGACGCAAAAAGAGAAATCCTGATATTAAAAGCTTTTCCCATGAACTCAACTCCAAAGGAGTTAGACCATTTCCAGTCTGGAGACATCGTGTCTTTGGTCACATGGAGGAAGTCATGGGGGCAATTAGAGCTAAGTTTGAAAAATTAAAGGAAGAAGTTGATTATGACTTGGGTGGCTTCGCTGGGGATTTGGTGGGCATTCTTGAAAAAAATTTAGTGTCTGAACGTGAATGGAAAGAGAGGTTGGAGGATCTGTTGGTTGTTGCTCGACAATGTGCAAAGATGCCTCCTAGCGACTTTTGGATCAAATGTGAATCGATTGTTCAAAATCTCGATGACAAACGTCAAGAATTACCAGTGGGTGTTCTCAAGCAAGCTCATACACGCCTACTGTTTATTCTCACTCGTTGCACTCGTCTAGTGCAATTCCATAAGGAAAGCGGATATGAACAAGAACACATTCTGAGTCTTCACCAACTCAGCGATCTTGGGGTCTATCCTGAGCAAATTTTGAAGGCTGCACAGCAGAAATCCAGTACACCTGATGGACATGAGATGGCTGAGAAAGAGTTGAAAATTTCACATGGTAAAGAGAAAGACAAACCGATAACAAAACAAAGTCAAGCTGATCAACGTGTAAGTGTTGTCATTGACAATGTGGAGGATGCTACAACCAAAAGTGTGGAATCAACTCCTAGCAGCTATAGAATGTCTTCTTGGAAAAAGCTTCCATCTGCTGCTGAGAAAAAGCGAAAAGGTCAAGAAGCTGTAGATTTCCCATCCAAAGGCGAACTAGATCACTTGCTAGTCAAAGATGAAAATGCTGAAAATTTGGATACTTTGTCATGTCATCCTGATCATTCACAATCGTCATCAAGAACGCGAAGGGTTTCTTGGGGATTCTGGGGAGATCAGCAACATCTACCATACGAGGATTCATTGATATGCAGGATTTGTGAGGTTGAAATACCGATTGTACATGTGGAGGAGCATTCTCGAATATGCACAATTGCTGATAGATGTGATTTGAAAGGCTTAACTGTAAATGAACGGCTTGAAAGAGTTTCTGAAACCATTGAGAGGATACTGGAGTCCTGGACACCTAAAAGCACACCAAAAAGCACTGATACTCCTGGAGAAAGCTTCGAGGTTGCCACAGTGTCAACATCAAGTGTGCATGAAGTATTCAATGATTTATCACTAGAGAGAAATAACCTGACTTGTAGATGCTCTGAAGACATGCTTGACTCTACTGCAGAACCTGAGAATACTTTTGTCATGGAGGATCTGAACCTTTCACCCAGAATATCATGTGAAGCTCGCACATGCTTAAAATCTGATCATGGAACAAAGGTATCTTCAGCTGGAAGCTTGACACCGAGATCACCATTGGTAACACCACGAACCACTCAGATAGAAATGTTACTAAGTGGACGAAGAACATTATCTGAACTTGAGAGTTGTGACCAGATAAACAAACTAGTTGAAATAGCTCGAGCTGTTGCAAATGTGAACAACTGTGACTACAGTGCTCTGGAGTATATGCTTGATCGCTTAGAAGACTTGAAATACGCCATTCAAGACAGAAAAGTGGATGCACTTATTGTGGAGACTTTTGGACGACGAATAGAGAATCTTTTGCAGGAGAAGTATATATCTCTTTGTGGGCAGATAGAAGATGAAAAGCTAGACTCATCAAATAGCATGGCTGATGAAGAGAGTTCAGTGGAAGAAGAAACAGTTCGTAGCCTTCGTGCTAGCCCTATTAATGCTTGTTCCAAGGACCGAACCTCTATCGAAGACTTTGAAATAATAAAACCAATAAGTAGGGGTGCATTTGGACGAGTTTTTCTTACCCGAAAAAGAGCAACTGGTGATTTATTTGCTATAAAGGTTCTGAAAAAGGCAGATATGATCCGTAAAAATGCAGTTCAAAGTATTTTGGCAGAGCGAGACATCCTTATATCTGTTCGAAACCCTTTTGTGGTCCGGTTTTTCTACTCTTTTACATGTAGGGAAAATCTTTATCTAGTCATGGAGTATTTGAATGGTGGAGATCTTTATTCTCTGTTGAGAAATCTAGGTTGTTTAGATGAAGATATGGCTCGTGTATATATTGCAGAAGTTGTCCTTGCATTGGAGTACTTGCATTCCTTAAATGTGATTCACAGAGACTTGAAGCCAGATAACTTACTGATTGGTCAAGATGGTCATATTAAGTTGACAGATTTCGGGCTCTCCAAGGTTGGTCTTATAAACAGCACAGACGATTTATCAGCGCCATCAGTTTCCACCAATGGTTTCTTAGGAGATCATGAACCAAAACCTCGACATTCTTCAAAAAGGGAAGAGCGTCAAAAACAATCTGTAGTTGGCACCCCGGATTATTTGGCACCTGAAATACTTCTTGGCATGGGACATGGTGCAACTGCAGATTGGTGGTCCGTGGGTGTCATACTTTATGAGCTTCTTGTGGGTATTCCACCATTTAATGCAGAACATCCACTGCAAATTTTTGATAACATAATTAACAGAGACATACAGTGGCCTCAGATTCCTGAGGAGATCAGCTTTGAAGCATATGATTTGATAAATAAATTATTGAATGAAAATCCAGTCCAAAGATTAGGTGCAACAGGAGCCGCAGAAGTTAAATTCCACTCTTTCTTCAAGGATGTTAATTGGGATACCCTAGCAAGGCAGAAGGCTATGTTCATTCCATCGACTGAGGCTCTTGATACAAGTTATTTTATGAGCCGGTACATTTGGAATCCCGAGGATGAACATTGTCTCGGAGGTAGTGATTTTGATGACATTACTGACACATGCAGCAGTGGTTCAGGCAGCGATTTATTAGATGAAGATGGTGATGAATGTGGTAGTTTAGCAGATTTCACTGGTCCACCTCTTGAATTGCAGTACTCATTTAGTAATTTCTCATTTAAGGAAAAGGATGGGATTTTCCCCAAACAAGTACCTCCAGTTATAACTTTTGTTTTAGGAGGCCCTGGTAGTGGAAAAGGTACACAATGTGCAAAAATTGTTGACGCCTTTGGATTTAAGCATCTGAGTGCTGGAGATCTTTTGAGAAGGGAGATGGTTTCTGCTAGAAGAATTGTTCCATCAGAAGTGACTGTCAAATTGATTCTAAGAGAGATGGAATCTAGTGACAATCGTAAGTTTCTTATTGATGGTTTCCCTAGAAGCGAGGAGAATCGCATAGCTTTTGAACAAATTATTGAAGCAGAACCACGTATGGTACTTTTCTTTGATTGCCCTGAAGAGGAGATGGTGAAACGTGTGCTGAGCCGTAATCAGGGTCGAATTGATGACAACATAGATACAATAAAGAAACGTCTTCAAATATTTGAGGCATTAAATCTTCCTGTGATTGATTATTATGCTAAGAAAGGGAAACTTTACAGGATCAATGCAGTGGGAACAGTAGATGAAATATTTGAGCAAGTTCGCCCAGTTTTTGAGGCAAGTCAGAGACGGTGGGAAAGCCAAGAAAGAAGAAACGCTCTTTCTTTCCCAAAACCGAAATCAACCCCACTCCTTATCCATCACCGACCTCATCCCCAAACAAAATTGGAGGCACTTGAACGAGTGGTCACAGACCTTGAAGCTTCTGTTGAAAAGGGCATCAGAATCGACCCTGAAATCTATGCCTCTTTGTTAGAAACCTGCTACCGCTTGCAAGCCATTCGTCACGGTATCCGAGTCCATCGCCTTATCCCAACATCCCTATTGCATAAAAATGTCGGCATTTCCTCGAAGCTTCTTAGGTTGTACGCTTCGTATGGGTATGTGGATGATGCCCACGACTTGTTCGATCAAATGACTAAGAGGGATACGTTTGCATTTCCCTGGAATTCACTCATCTCAGGATATGCCCAAGTAGGCCTCTACGATGATGCCATTGCGCTCTACTTCCAAATGGTGGAAGAGGGTGTTGAACCTGACTTGTTTACCTTCCCTCGGGTTCTCAAAGTTTGTGCGGGAATTGGGTCTGTTCAACTTGGGGAAGAGGTGCATCGCCACGTCGTTCGTTCTGGCTTTGCCAATGATGGGTTTGTCCTCAATGCACTTGTTGACATGTATGCCAAGTGCGGTGACATTGTAAAGGCACGAAAGGTCTTTGACAATATGCCTCATAGAGACCCTGTTTCATGGAATTCGATGCTCGCAGCGTATGTTCATCATGGCCTTGAGGTTGAGGCAATGAACGTTTTCCGCCAAATGATTTTGGAAGGGCGTGAACCTGACTCTGTTAGCATATCCACCATTGTTACAGGTGTGTCATCACTGGGTCTTGGGGTCCAAATTCATGGATGGGTAATCCGGCAAGGATATGAATGGAACTTGTCCATTGCTAATTCCTTGATCATGATGTACTCCAATCATGGCAAGTTGGAAAAGGCAAGTTGGATATTCAATCTTATGCCAGAGAGGGATGTTGTTTCGTGGAATTCTATAATATCTGCACATTGCAAACACCGTGATGCCCTTACTTATTTCGAGCAAATGGAGGAAGCTGGTGCCGAGCCTGATAAAATAACATTTGTTTCAATATTGTCAGCCTGTGCCTACTTAGGTTTGGTGAAGGATGGAGAAAGATTGTTTGCTCTAATGTGTGGAAAATATAAAATAAAACCAATTATGGAACATTATGGTTGTATGGTTAACCTTTATGGAAGGGCAGGACTGATTAAAAAGGCTTATAGCGTCATAGTCGATGGAATGGACTCTGAGGCAGCTGGTCCAACTCTGTGGGGAGCTTTATTGTATGCTTGCTTTTTGCACGGAGATGCAACTATAGGGGAGATTGCTGCAAACAGGCTTTTTGATTTAGAGCCAGACAATGAGCATAATTTTGTACTTCTTATGAGAATTTTTGAAAATGCAGGTAGATTAGAGGACATGGAGAGAGTTAGAACGATGCTGGTTGACAGAGGATTGGATTATTAG 5466 0.4248 MSSTPPPHSPLKPDQGDPAPMKPSPLAGRIKLQKIPPIPIRRSKVGYEELEEEEEEDECGDSSILLASSLGLNHIRTRSSSSPLRYSSSVGAPSFLTQDAVTINEARVRSKPSQPKKDIGGKVHLGQSKSLRPHSQLNPVLEGHHAAFAKEIQSPRFQEILRLTSGRKKRNPDIKSFSHELNSKGVRPFPVWRHRVFGHMEEVMGAIRAKFEKLKEEVDYDLGGFAGDLVGILEKNLVSEREWKERLEDLLVVARQCAKMPPSDFWIKCESIVQNLDDKRQELPVGVLKQAHTRLLFILTRCTRLVQFHKESGYEQEHILSLHQLSDLGVYPEQILKAAQQKSSTPDGHEMAEKELKISHGKEKDKPITKQSQADQRVSVVIDNVEDATTKSVESTPSSYRMSSWKKLPSAAEKKRKGQEAVDFPSKGELDHLLVKDENAENLDTLSCHPDHSQSSSRTRRVSWGFWGDQQHLPYEDSLICRICEVEIPIVHVEEHSRICTIADRCDLKGLTVNERLERVSETIERILESWTPKSTPKSTDTPGESFEVATVSTSSVHEVFNDLSLERNNLTCRCSEDMLDSTAEPENTFVMEDLNLSPRISCEARTCLKSDHGTKVSSAGSLTPRSPLVTPRTTQIEMLLSGRRTLSELESCDQINKLVEIARAVANVNNCDYSALEYMLDRLEDLKYAIQDRKVDALIVETFGRRIENLLQEKYISLCGQIEDEKLDSSNSMADEESSVEEETVRSLRASPINACSKDRTSIEDFEIIKPISRGAFGRVFLTRKRATGDLFAIKVLKKADMIRKNAVQSILAERDILISVRNPFVVRFFYSFTCRENLYLVMEYLNGGDLYSLLRNLGCLDEDMARVYIAEVVLALEYLHSLNVIHRDLKPDNLLIGQDGHIKLTDFGLSKVGLINSTDDLSAPSVSTNGFLGDHEPKPRHSSKREERQKQSVVGTPDYLAPEILLGMGHGATADWWSVGVILYELLVGIPPFNAEHPLQIFDNIINRDIQWPQIPEEISFEAYDLINKLLNENPVQRLGATGAAEVKFHSFFKDVNWDTLARQKAMFIPSTEALDTSYFMSRYIWNPEDEHCLGGSDFDDITDTCSSGSGSDLLDEDGDECGSLADFTGPPLELQYSFSNFSFKEKDGIFPKQVPPVITFVLGGPGSGKGTQCAKIVDAFGFKHLSAGDLLRREMVSARRIVPSEVTVKLILREMESSDNRKFLIDGFPRSEENRIAFEQIIEAEPRMVLFFDCPEEEMVKRVLSRNQGRIDDNIDTIKKRLQIFEALNLPVIDYYAKKGKLYRINAVGTVDEIFEQVRPVFEASQRRWESQERRNALSFPKPKSTPLLIHHRPHPQTKLEALERVVTDLEASVEKGIRIDPEIYASLLETCYRLQAIRHGIRVHRLIPTSLLHKNVGISSKLLRLYASYGYVDDAHDLFDQMTKRDTFAFPWNSLISGYAQVGLYDDAIALYFQMVEEGVEPDLFTFPRVLKVCAGIGSVQLGEEVHRHVVRSGFANDGFVLNALVDMYAKCGDIVKARKVFDNMPHRDPVSWNSMLAAYVHHGLEVEAMNVFRQMILEGREPDSVSISTIVTGVSSLGLGVQIHGWVIRQGYEWNLSIANSLIMMYSNHGKLEKASWIFNLMPERDVVSWNSIISAHCKHRDALTYFEQMEEAGAEPDKITFVSILSACAYLGLVKDGERLFALMCGKYKIKPIMEHYGCMVNLYGRAGLIKKAYSVIVDGMDSEAAGPTLWGALLYACFLHGDATIGEIAANRLFDLEPDNEHNFVLLMRIFENAGRLEDMERVRTMLVDRGLDY 1821
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr1720g00004 1821 MobiDBLite consensus disorder prediction 1 20 - -
Mupr1720g00004 1821 Pfam Adenylate kinase 1164 1303 - -
Mupr1720g00004 1821 CDD ADK 1163 1317 IPR000850 GO:0005524|GO:0006139|GO:0019205
Mupr1720g00004 1821 ProSitePatterns Serine/Threonine protein kinases active-site signature. 886 898 IPR008271 GO:0004672|GO:0006468
Mupr1720g00004 1821 MobiDBLite consensus disorder prediction 347 371 - -
Mupr1720g00004 1821 Pfam PPR repeat family 1553 1599 IPR002885 -
Mupr1720g00004 1821 Pfam PPR repeat family 1650 1695 IPR002885 -
Mupr1720g00004 1821 Pfam PPR repeat family 1456 1498 IPR002885 -
Mupr1720g00004 1821 Pfam Protein kinase domain 767 1051 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr1720g00004 1821 ProSiteProfiles Protein kinase domain profile. 767 1055 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr1720g00004 1821 CDD STKc_MAST_like 773 1060 - -
Mupr1720g00004 1821 MobiDBLite consensus disorder prediction 928 955 - -
Mupr1720g00004 1821 MobiDBLite consensus disorder prediction 107 135 - -
Mupr1720g00004 1821 Gene3D Tetratricopeptide repeat domain 1362 1505 IPR011990 GO:0005515
Mupr1720g00004 1821 SMART serkin_6 767 1055 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr1720g00004 1821 Pfam E motif 1767 1814 IPR046848 -
Mupr1720g00004 1821 FunFam probable serine/threonine protein kinase IREH1 765 854 - -
Mupr1720g00004 1821 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 1553 1587 IPR002885 -
Mupr1720g00004 1821 PRINTS Adenylate kinase signature 1163 1176 IPR000850 GO:0005524|GO:0006139|GO:0019205
Mupr1720g00004 1821 PRINTS Adenylate kinase signature 1273 1288 IPR000850 GO:0005524|GO:0006139|GO:0019205
Mupr1720g00004 1821 PRINTS Adenylate kinase signature 1290 1304 IPR000850 GO:0005524|GO:0006139|GO:0019205
Mupr1720g00004 1821 PANTHER PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN 1552 1819 IPR046960 GO:0003723|GO:0009451
Mupr1720g00004 1821 FunFam Pentatricopeptide repeat-containing protein, chloroplastic 1506 1604 - -
Mupr1720g00004 1821 SUPERFAMILY Protein kinase-like (PK-like) 752 1078 IPR011009 -
Mupr1720g00004 1821 Gene3D Phosphorylase Kinase; domain 1 765 1082 - -
Mupr1720g00004 1821 MobiDBLite consensus disorder prediction 1 38 - -
Mupr1720g00004 1821 Gene3D Tetratricopeptide repeat domain 1506 1603 IPR011990 GO:0005515
Mupr1720g00004 1821 Gene3D Tetratricopeptide repeat domain 1604 1714 IPR011990 GO:0005515
Mupr1720g00004 1821 MobiDBLite consensus disorder prediction 340 423 - -
Mupr1720g00004 1821 Hamap Adenylate kinase [adk]. 1160 1326 IPR000850 GO:0005524|GO:0006139|GO:0019205
Mupr1720g00004 1821 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 1620 1654 IPR002885 -
Mupr1720g00004 1821 FunFam Pentatricopeptide repeat-containing protein At4g25270, chloroplastic 1361 1505 - -
Mupr1720g00004 1821 FunFam pentatricopeptide repeat-containing protein At2g33680 1624 1821 - -
Mupr1720g00004 1821 NCBIfam pentatricopeptide repeat 1555 1588 IPR002885 -
Mupr1720g00004 1821 NCBIfam pentatricopeptide repeat 1456 1487 IPR002885 -
Mupr1720g00004 1821 NCBIfam pentatricopeptide repeat 1525 1551 IPR002885 -
Mupr1720g00004 1821 ProSiteProfiles AGC-kinase C-terminal domain profile. 1056 1156 IPR000961 GO:0004674|GO:0005524|GO:0006468
Mupr1720g00004 1821 Gene3D - 1152 1326 IPR027417 -
Mupr1720g00004 1821 MobiDBLite consensus disorder prediction 936 954 - -
Mupr1720g00004 1821 MobiDBLite consensus disorder prediction 372 405 - -
Mupr1720g00004 1821 MobiDBLite consensus disorder prediction 408 423 - -
Mupr1720g00004 1821 Gene3D Transferase(Phosphotransferase) domain 1 851 1073 - -
Mupr1720g00004 1821 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 1452 1486 IPR002885 -
Mupr1720g00004 1821 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 1522 1552 IPR002885 -
Mupr1720g00004 1821 ProSitePatterns Adenylate kinase signature. 1226 1237 IPR033690 -
Mupr1720g00004 1821 Pfam PPR repeat 1526 1551 IPR002885 -
Mupr1720g00004 1821 Pfam PPR repeat 1426 1449 IPR002885 -
Mupr1720g00004 1821 Pfam PPR repeat 1722 1743 IPR002885 -
Mupr1720g00004 1821 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1159 1325 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr1720g00004 Mupr-Chr1720 42096 61972 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr1720g00004 32 1147 AGC Kinase Gene Family AT5G62310 64.336 0.0 1412
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_MAST Mupr1720g00004 Pkinase 1.4e-63 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr1720g00004 - - gmx:100817975 1966.43