Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr1720g00002 ATGGATGCCATTTGTTGTTGTAAGCATCTTATCACATCCTTTCTCATAATTCTGGTTTCTAGTTTGAGCACAGAGTGTGGCAGACCATACCAAGAGGCGAGCACAGTGTTCATAAGAACATCTTGTAGTTCAACAAGTTATCCAAGACTGTGCTACAGCTCCCTAGTGAAGCATGCAGACTTAATTCAAACAAATCGTGTGGTTTTAACAGGCACAGCCCTGAATGTGACTCTTGCATCTACCAAATCCACCTCGGCAATGATGTCAACGCTGGCAAAGAGCCAAGGACTGAATCCAAGAGAGGTTGCAGCGATGAAGGACTGTGTGGAGGAGCTTGGTGACTCTGTGGATGAACTACGAAGGTCTATTGATGAGATGAATCATCTAAGACCCTCCAATTTTGATGATGTACAAACATGGGTGAGTGCTGCTTTGACTGATGAAAGCACGTGCACTGATGGTTTTCAAGAGACAGACATTGGTGGTGCTGATTCCAACATTAAGAACACCATTAGAGGGCCATCTGCTTCCAAATCCACAACCACCACCGATTCCCTCAAAGCCTACAAAAAGTTCATAAAAGATCAGTGCAATTCAACCACTTACCCAAATGTTTGCTACAAGTCTCTCTCCCCTTACGCATCTAAAATCAAAAGAAACCGCGTAACGCTCACCAAAATCTCTATTCATGTGGCTCTAAAAGCAGCCAAAAGTGCATATAGCACATTGACAAAGGTATCAAAATCAAAGGGAAAGCTAACACATGGAGAAACGTTGGTGATTGCAGATTGCCGAGAGAATGTTGAAGACACGTTGGATCTGCTTGAGCAATCTGCTGATGGGTTGGCAAATTTGAATGGTACATCTACTAATGATGAGAAATTTCAATGGGACACCATAAAGACATGGATGAGTGCTGCCATAACCGATGAGTCCACATGCACGGATGAGTTTCAAGAAATTCAAGTGCGTCCTTCGCTCCAGAAGAAGATCAAAACCACCGTTGATAAA 1011 0.4322 MDAICCCKHLITSFLIILVSSLSTECGRPYQEASTVFIRTSCSSTSYPRLCYSSLVKHADLIQTNRVVLTGTALNVTLASTKSTSAMMSTLAKSQGLNPREVAAMKDCVEELGDSVDELRRSIDEMNHLRPSNFDDVQTWVSAALTDESTCTDGFQETDIGGADSNIKNTIRGPSASKSTTTTDSLKAYKKFIKDQCNSTTYPNVCYKSLSPYASKIKRNRVTLTKISIHVALKAAKSAYSTLTKVSKSKGKLTHGETLVIADCRENVEDTLDLLEQSADGLANLNGTSTNDEKFQWDTIKTWMSAAITDESTCTDEFQEIQVRPSLQKKIKTTVDK 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr1720g00002 337 Pfam Plant invertase/pectin methylesterase inhibitor 191 332 IPR006501 GO:0004857
Mupr1720g00002 337 Pfam Plant invertase/pectin methylesterase inhibitor 37 174 IPR006501 GO:0004857
Mupr1720g00002 337 Coils Coil 109 129 - -
Mupr1720g00002 337 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 190 329 IPR035513 -
Mupr1720g00002 337 Gene3D Invertase/pectin methylesterase inhibitor family protein 33 180 IPR035513 -
Mupr1720g00002 337 Gene3D Invertase/pectin methylesterase inhibitor family protein 188 336 IPR035513 -
Mupr1720g00002 337 PANTHER PECTINESTERASE INHIBITOR-LIKE 13 167 - -
Mupr1720g00002 337 Coils Coil 265 285 - -
Mupr1720g00002 337 SMART PMEI_2 33 177 IPR006501 GO:0004857
Mupr1720g00002 337 SMART PMEI_2 188 332 IPR006501 GO:0004857
Mupr1720g00002 337 FunFam Pectinesterase 34 192 - -
Mupr1720g00002 337 CDD PMEI-like_3 197 321 - -
Mupr1720g00002 337 CDD PMEI-like_3 40 186 - -
Mupr1720g00002 337 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 37 169 IPR035513 -
Mupr1720g00002 337 NCBIfam pectinesterase inhibitor domain 8 159 IPR006501 GO:0004857
Mupr1720g00002 337 NCBIfam pectinesterase inhibitor domain 181 328 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr1720g00002 Mupr-Chr1720 20729 31621 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr1720g00002 193 329 Carbohydrate Esterase AT3G14310 29.078 1.83e-09 57.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr1720g00002 - - gmx:100527377 275.789