Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr17205g00001 ATGGGCATGAAGAGCACTGGGGGAGAGATTGTTCAAGTCCAAGGAGGGCACATTGTTCGGTCCACAGGTAGAAAAGATAGGCACAGTAAGGTTTTCACTGCAAAGGGTCCTCGTGATCGCAGGGTTAGGCTCTCAGCACACACAGCCATTCAGTTTTATGATGTTCAAGATCGTTTAGGCTATGACAGACCCAGCAAGGCCGTGGATTGGCTCATCAAGAAGGCCAAGAATGCCATTGACAAGCTCGCTGAGCTTCCTCCATGGCACCCTACTCCTAACACTGCAAATGCTGACCACAACAATAACAATGCTGCAGGGTCTAGTGACATGGCCATTGCAGAACAATCAGAGTCTTCTGGCTACAACTTTCAGCTGCAAAGGCAATTAGGTGAGGACCATGATAACCACCATTCAGCTTTCATTCCTTCCCCTATTGACACTGATGCAATAGCCTTCTTTCCCACAACCACTGCCACCTCCTCCATCAATTTCCAAACCTACCCTCCTGACATAATCTCCAGAACCAACAACTCCACTGAGGATCTTGGCCTCTCTCTTCACTCCTTCCAAGACCCTGGCCTCATTCATGCGCAGTCCCAAGCAGGTGCAAACCAAACACCTTCCAATGACCAAACCCTCTTCTCTGGTTCAACTCAAGGGGGGTTTGAGGCCAATTACCCCAGGATTGTCTCATGGAACAATGATGCAAGTACAGATATGAACAGAACCGGGTTCATGGTCAATTCACCACCACTTCTAGGCCAAGGTGCTTCTGCATATTCCCAAAGGGGGACCCTTCAGTCCAGTTTCTCACCCTCACTTCGTCCTTGGAGTGACATTCCCATGCCTTCCTCAGAACATCACAAGTCACAACCAATTCAACAGCCTTCCATCTTTGGCAGCAGATTTCTCTCTAATGCATTGCCAGGCTTCTGCATTCCTGCTAGAATTCAAGCTGGATTCCGTGGTTGTAATTCGTATCGCTTCGTTAATGTCGAGAATAGCATAGTTCATCCGATATCAAGTGAACAGAAGAGGTTTCATGTCGATTGTGGTGAACCCCACTTCAAGAAAAACTTAAATCTATTTCACAATGATGCTGCGAAAGATCGCAGACATATAAAGATTGATACAGTTATGAATGTGGTCACCATATAG 1158 0.4698 MGMKSTGGEIVQVQGGHIVRSTGRKDRHSKVFTAKGPRDRRVRLSAHTAIQFYDVQDRLGYDRPSKAVDWLIKKAKNAIDKLAELPPWHPTPNTANADHNNNNAAGSSDMAIAEQSESSGYNFQLQRQLGEDHDNHHSAFIPSPIDTDAIAFFPTTTATSSINFQTYPPDIISRTNNSTEDLGLSLHSFQDPGLIHAQSQAGANQTPSNDQTLFSGSTQGGFEANYPRIVSWNNDASTDMNRTGFMVNSPPLLGQGASAYSQRGTLQSSFSPSLRPWSDIPMPSSEHHKSQPIQQPSIFGSRFLSNALPGFCIPARIQAGFRGCNSYRFVNVENSIVHPISSEQKRFHVDCGEPHFKKNLNLFHNDAAKDRRHIKIDTVMNVVTI 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr17205g00001 385 Pfam TCP family transcription factor 23 124 IPR017887 -
Mupr17205g00001 385 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 19 272 IPR005333 GO:0003700
Mupr17205g00001 385 ProSiteProfiles TCP domain profile. 24 82 IPR017887 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr17205g00001 Mupr-Chr17205 4986 7188 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr17205g00001 8 319 TCP Transcription Factor Family AT3G15030 43.272 5.15e-71 226
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Mupr17205g00001 TCP 3.2e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr17205g00001 - - pvu:PHAVU_005G097200g 574.704