Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr17199g00001 ATGACTGGTTCTGGTTCTCCTTGTGGAGCCTGCAAATTCTTGAGAAGAAAATGTGTGAGAGGTTGTGTTTTTGCACCTTACTTTTGCCATGAACAGGGTGCCACCCACTTTGCAGCCATTCATAAGGTCTTTGGTGCAAGCAATGTCTCAAAGCTCCTTGCTCACCTCCCTGTGAGTGATCGTTGTGAAGCTGCAGTCACAATCTCTTATGAAGCTCAAGCTAGACTTCAGGATCCAATTTATGGCTGTGTTGCACATATTTTTGCACTGCAACAACAGGTGGTGAATTTACAAGCACAGCTAGCTTATCTCAGGGAGCAAGCAGGTCAGATCTATCTCAATGCCTCTGCCACTGAAAACCCTAACGAGAAATACTTTGGAAAACCTACTACTTCCCCCCAAGATCTTCAAAGTTGGTTCCAAATGGAGAATTCCAACATGGCTTCACAAGTTCTTCCCAACTTTTCCACCAACCCCTCAACACAGTATTATGGGAATACTAATACTCTCATCGATCCAAACCCTATTGGAAATTATGAAAATTCAGCTGGAACCATAGACGAAAGCATCTCCTTTTCTAGCTTTGAAGAGAGTTGCAACTCCATGTCCTATGACATGCAAAGGCAAAACCCTATATGGAACAAAGTTACTCTTAATTCTCGGAAACAAGCAATCCCTAAGTTGGAGGCAAAGGAACATATTTGCAGAGAGAGCATATTGCTCAGGTTGGAATGGTGGGAGGAAAAGAATGGAGAA 756 0.4312 MTGSGSPCGACKFLRRKCVRGCVFAPYFCHEQGATHFAAIHKVFGASNVSKLLAHLPVSDRCEAAVTISYEAQARLQDPIYGCVAHIFALQQQVVNLQAQLAYLREQAGQIYLNASATENPNEKYFGKPTTSPQDLQSWFQMENSNMASQVLPNFSTNPSTQYYGNTNTLIDPNPIGNYENSAGTIDESISFSSFEESCNSMSYDMQRQNPIWNKVTLNSRKQAIPKLEAKEHICRESILLRLEWWEEKNGE 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr17199g00001 252 Coils Coil 87 107 - -
Mupr17199g00001 252 PANTHER LOB DOMAIN CONTAINING PROTEIN 1 164 - -
Mupr17199g00001 252 Pfam Lateral organ boundaries (LOB) domain 7 104 IPR004883 -
Mupr17199g00001 252 ProSiteProfiles LOB domain profile. 6 108 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr17199g00001 Mupr-Chr17199 5453 7384 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr17199g00001 7 133 AS2 family AT3G58190 76.744 6.03e-72 218
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Mupr17199g00001 LOB 7.6e-36 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr17199g00001 K13945 K13944 gmx:100816960 379.793