Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr17173g00001 GTTCTTCGCTTTTCCCTCTTTTTTTATCTCTTATTCTTTTCCTTTTCTATTCAATTCAAGCTCCATGCTTTCTGCAGGATCCTGCCGCCATTTCTAACCAACATGGGAGTTTGTTTGAGTGCCCAAATTAAAGCTGAAAGCCCATATAACACTGGGTTCAATTCCAAGTATGTGAGTTCGGATGGAAATGATCTGAGCAGCACAAACAGTAAGGTTTCAGCAAACTCGGTGCCTCAGACTCCTCGGAGTGAGGGGGAGATCTTGCAGTCATCCAATTTAAAGAGCTTTACCTTATCAGAACTTAAGACAGCCACTAGAAATTTCCGTCCAGATAGTGTGTTAGGAGAAGGTGGTTTTGGATCAGTTTTTAAGGGGTGGATTGATGAGAATTCATTGACTGCTACCAAACCTGGCACTGGCATTGTTATTGCTGTTAAAAGACTTAATCAAGATGGCATCCAGGGTCACAGGGAGTGGTTGGCTGAAGTCAACTATCTGGGACAACTTTCTCATCCTCATCTAGTGAGATTGATTGGGTTTTGCCTTGAAGATGAACATCGCCTTCTCGTCTATGAATTTATGCCTCGTGGAAGCTTGGAAAACCATTTGTTCAGGAGAGGCTCATATTTTCAACCACTTTCTTGGATCCTCCGATTGAAGGTTGCCCTTGATGCTGCCAAAGGGCTTGCATTTCTGCACAGTGGTGATACAAAAGTGATATATAGAGATTTTAAGACTTCAAATATCTTGCTGGATTCAAAATATAATGCAAAACTTTCTGATTTTGGGCTGGCAAAGGATGGACCAACAGGTGACAAAAGTCATGTCTCTACCAGGATAATGGGAACATACGGTTATGCAGCTCCTGAATATCTAGCCACAGGTCATCTTACTGCTAAGAGTGATGTCTATAGCTTTGGAGTTGTCCTTCTGGAAATATTATCTGGCAAGAGGGCAGTTGACAAGAATAGACCATCTGGACAACACAATTTGGTGGAATGGGCTAAACCTTACCTGGCAAACAAACGTAAGATTTTCCGCGTGTTGGACACCCGACTTGAAGGACAATATTTGACAGATGATGCCTGTAAGGTAGCCACCCTTGCCTTGCGGTGCCTATCAATAGAATCCAAGTTCAGGCCAAACATGGATGAAGTGGTTACAACTTTGGAGCAGCTGCAGGTTCCTAATGAAAATGGAGGCAATCAAAATCTTGTTAATGGGCCTCGTGCTCGTAGAAGAAGTGCGGATGTAAATGCCAATGGAGGCTATCGAAATCCTTCTGTTAATGGATCTCGAGTTCGAAGAAGAAGTGCTGATGATTTTAGCCGTGTGGAGACTCCCACAGCTTATCCCAGGCCCTCTGCATCCCCTCTCTATACTTGA 1386 0.4343 VLRFSLFFYLLFFSFSIQFKLHAFCRILPPFLTNMGVCLSAQIKAESPYNTGFNSKYVSSDGNDLSSTNSKVSANSVPQTPRSEGEILQSSNLKSFTLSELKTATRNFRPDSVLGEGGFGSVFKGWIDENSLTATKPGTGIVIAVKRLNQDGIQGHREWLAEVNYLGQLSHPHLVRLIGFCLEDEHRLLVYEFMPRGSLENHLFRRGSYFQPLSWILRLKVALDAAKGLAFLHSGDTKVIYRDFKTSNILLDSKYNAKLSDFGLAKDGPTGDKSHVSTRIMGTYGYAAPEYLATGHLTAKSDVYSFGVVLLEILSGKRAVDKNRPSGQHNLVEWAKPYLANKRKIFRVLDTRLEGQYLTDDACKVATLALRCLSIESKFRPNMDEVVTTLEQLQVPNENGGNQNLVNGPRARRRSADVNANGGYRNPSVNGSRVRRRSADDFSRVETPTAYPRPSASPLYT 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr17173g00001 461 FunFam Serine/threonine-protein kinase BIK1 75 193 - -
Mupr17173g00001 461 ProSitePatterns Serine/Threonine protein kinases active-site signature. 239 251 IPR008271 GO:0004672|GO:0006468
Mupr17173g00001 461 MobiDBLite consensus disorder prediction 394 409 - -
Mupr17173g00001 461 SUPERFAMILY Protein kinase-like (PK-like) 82 390 IPR011009 -
Mupr17173g00001 461 Gene3D Phosphorylase Kinase; domain 1 83 193 - -
Mupr17173g00001 461 ProSitePatterns Protein kinases ATP-binding region signature. 114 146 IPR017441 GO:0005524
Mupr17173g00001 461 FunFam Probable serine/threonine-protein kinase PBL8 194 408 - -
Mupr17173g00001 461 Gene3D Transferase(Phosphotransferase) domain 1 194 408 - -
Mupr17173g00001 461 CDD STKc_IRAK 114 393 - -
Mupr17173g00001 461 PANTHER OS01G0588500 PROTEIN-RELATED 73 394 - -
Mupr17173g00001 461 MobiDBLite consensus disorder prediction 394 461 - -
Mupr17173g00001 461 Pfam Protein tyrosine and serine/threonine kinase 112 390 IPR001245 GO:0004672|GO:0006468
Mupr17173g00001 461 ProSiteProfiles Protein kinase domain profile. 108 393 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr17173g00001 Mupr-Chr17173 1338 3791 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr17173g00001 54 390 Glycoside Hydrolase AT3G07070 46.450 6.29e-103 311
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Mupr17173g00001 PK_Tyr_Ser-Thr 1.8e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr17173g00001 - - gmx:100798404 794.267