Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr17136g00001 ATGAAAGTTGAGGAGGAAGGTGAAATTATGAGCCGCAATATGAACAATCTCACACCTTTTCCGGGACATTGGCAAAGAGGTTTCAGAGCCTATGATGACCACACTTTCAGTAATCGTGAATCCAATGAGGTGCCTGTGTTTTACAGATCTCGCTCTTCTCGTGCCACCGATGACAGAAGTTCAGGTGTATTAGCTCCACAACGGTTTTGGGACTTCAGAAATCCTTTAGGATTCCACAGTACTATACTAAATTTTCCAGAACCACCACCACCTAGTAGACAACAAATTCATGTTCACAATGGGGATATGGGAAGGCTTACAGGGTTTTTCCATCAGCCACCTCCAAGATCCACACTCCAACCAACCACACAAGCTCCATCAGTGGTAGAAATTTCCAAATCAACAGCTTTGAGCAAGCTTAAGAAAGTAGTCTATGACCCTCCCCCAACGAGGTACGCTAGGAGTTTGAGCTTATATTATAGAAATAATAATACTGCAAAACCTTTGAAAGAGAAGAAGGGAGAAAAGGATGAAGATGGTAAGAGCTGTGCTATTTGCTTGGAAGATTTTGAGCCCAATGAAGAGGTGATGCTCACTCCATGCAACCACATGTTTCATGAGGATTGCATAGTACCGTGGCTAACAAGCAAAGGTCAGTGCCCAGTTTGTAGGTTTGTTATTTGTGAGAGAGGGAGGGGAAATCCTTCACCCTTCAACAACAATGACATTGCCAATTTGGAACCTAGCAACCTCATTAATGGAGAGCTTTTGTCAATTGAGGACCATGGAAGAAGCTTTCCAATTGGGCAGTATGAATTACTAATGTACACGTAA 834 0.4281 MKVEEEGEIMSRNMNNLTPFPGHWQRGFRAYDDHTFSNRESNEVPVFYRSRSSRATDDRSSGVLAPQRFWDFRNPLGFHSTILNFPEPPPPSRQQIHVHNGDMGRLTGFFHQPPPRSTLQPTTQAPSVVEISKSTALSKLKKVVYDPPPTRYARSLSLYYRNNNTAKPLKEKKGEKDEDGKSCAICLEDFEPNEEVMLTPCNHMFHEDCIVPWLTSKGQCPVCRFVICERGRGNPSPFNNNDIANLEPSNLINGELLSIEDHGRSFPIGQYELLMYT 277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr17136g00001 277 ProSiteProfiles Zinc finger RING-type profile. 183 224 IPR001841 -
Mupr17136g00001 277 SMART ringv_2 182 224 IPR011016 GO:0008270
Mupr17136g00001 277 Pfam Ring finger domain 182 224 IPR001841 -
Mupr17136g00001 277 PANTHER RING FINGER AND PROTEASE ASSOCIATED DOMAIN-CONTAINING 63 225 - -
Mupr17136g00001 277 FunFam RING/U-box superfamily protein 167 241 - -
Mupr17136g00001 277 CDD RING-H2_SIS3 181 227 - -
Mupr17136g00001 277 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 168 236 IPR013083 -
Mupr17136g00001 277 SMART ring_2 183 223 IPR001841 -
Mupr17136g00001 277 SUPERFAMILY RING/U-box 174 230 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr17136g00001 Mupr-Chr17136 511 2366 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr17136g00001 88 259 C3H Transcription Factor Family AT3G58720 42.308 6.79e-36 127
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr17136g00001 - - gmx:100810607 400.208