Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Mupr17109g00002 | ATGCAATTAGCATCAAATGGTGACAAGGAAGAATGTTCAGAAAGCGAACCCATCTTGAATCACCATCTTCATTCACAACCATCTGGAGAACCCTCCTTTTCCTGTGAAATTATTCCTATTCCTATTCCTGCTTCTCCCAACAATGATGACGATGATTTACAAAACGTTCGGGTTGATGAGACTTCTCATCTCATAAATGCTGATCAGCCACAATGCCGAATATGTCTCGATATTGGAGGAGAAGATTTAATTGCCCCATGCCATTGCAAAGGTACACAAAAGTACGTCCACAGATCATGTCTTGATAATTGGAGATCCACCAAGGAGGGCTTCGCCTTTTCTCACTGTACAGAGTGCAGAGCTGTCTTCATATTACGTGCAAATGTCCCACCAGATCGGTGGTGGTTGAGATTAAAATTTCAGTTCCTTGTTGCTAGGGATCATGCATTCATTTTCATAATTGTTCAACTGGTTGTTGCTTTCTTGGGAGTGCTTGTGTACAAATTTTATGGAGATGAACTGAGGGAAATGTTTGGCTATGAAGAACATCCATATGGATTTTATACAATGGCCGTTCTAGCCATTGTTTTGGTGGGTTTGCTCTATGGCTTCTTCATAGCAATAATATGTGGCCAAAGAATCAATGAACGCCACTACCATGTTCTTGCTAAACAAGAATTGACTAAGGAATATGTGGTAGAAGATCGAGAACATGTAAAGAATGTGCCTGAACTTGATCCCAGCCATGTGACAGAGCTAAGGATGTTGGGCCTTTACTAG | 780 | 0.4115 | MQLASNGDKEECSESEPILNHHLHSQPSGEPSFSCEIIPIPIPASPNNDDDDLQNVRVDETSHLINADQPQCRICLDIGGEDLIAPCHCKGTQKYVHRSCLDNWRSTKEGFAFSHCTECRAVFILRANVPPDRWWLRLKFQFLVARDHAFIFIIVQLVVAFLGVLVYKFYGDELREMFGYEEHPYGFYTMAVLAIVLVGLLYGFFIAIICGQRINERHYHVLAKQELTKEYVVEDREHVKNVPELDPSHVTELRMLGLY | 259 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Mupr17109g00002 | 259 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 65 | 124 | IPR013083 | - | |
Mupr17109g00002 | 259 | MobiDBLite | consensus disorder prediction | 1 | 31 | - | - | |
Mupr17109g00002 | 259 | CDD | RING_CH-C4HC3_MARCH | 72 | 120 | - | - | |
Mupr17109g00002 | 259 | SUPERFAMILY | RING/U-box | 67 | 123 | - | - | |
Mupr17109g00002 | 259 | SMART | ringv_2 | 71 | 120 | IPR011016 | GO:0008270 | |
Mupr17109g00002 | 259 | ProSiteProfiles | Zinc finger RING-CH-type profile. | 64 | 126 | IPR011016 | GO:0008270 | |
Mupr17109g00002 | 259 | PANTHER | RING/FYVE/PHD ZINC FINGER SUPERFAMILY PROTEIN | 192 | 259 | - | - | |
Mupr17109g00002 | 259 | Pfam | RING-variant domain | 72 | 119 | IPR011016 | GO:0008270 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Mupr17109g00002 | Mupr-Chr17109 | 8005 | 13153 | Dispersed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Mupr17109g00002 | 59 | 218 | C3H Transcription Factor Family | AT1G50440 | 75.000 | 1.92e-88 | 260 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Mupr17109g00002 | - | - | gmx:100789593 | 495.738 |