Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr17101g00001 ATGAAGGGTTACGAGCCACGTTCAAGCTCTTCTTGCGCAGCCTGCAAGTTCTTGAAAAGGAGATGCATACCCAATTGTATATTTGCACCTTACTTTCGGTCCGACGAGTGCAAGAAATTCGCCAAGGTTCACAAGGTGTTTGGGGCCAGCAATGTGAGCAAGATCCTGGTTGAAGTGCCTGAGGAGCAGAGAGAGGATACGGTGAATTCACTTGCTTATGAGGCAGAAGCCAGGCTTAGGGACCCTGTTTATGGATGCATTGGTGCCATAGCTTTGTTGCAAAGGAAGATGGTCGAGCTTCAGCATGATCTTGCCATTGCTAAGGACCGTCTTGCTCGCTATGCTGCTGCTGCTACCACCCCTTCTCCTGATATTAATTCCCATGTTACTTTGCCACCCTTCCCTGACTTTTTCACTTGTGCTGATTTCAATGACAACTTCTGCCACACCTCTTCGTCTCAATCCTTCACCAGACATGAAACGACAGTGGACCAGATGAACCTGAGCATTGATTGCCAGTACCTACATGTGTGA 534 0.4813 MKGYEPRSSSSCAACKFLKRRCIPNCIFAPYFRSDECKKFAKVHKVFGASNVSKILVEVPEEQREDTVNSLAYEAEARLRDPVYGCIGAIALLQRKMVELQHDLAIAKDRLARYAAAATTPSPDINSHVTLPPFPDFFTCADFNDNFCHTSSSQSFTRHETTVDQMNLSIDCQYLHV 177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr17101g00001 177 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 9 132 - -
Mupr17101g00001 177 Pfam Lateral organ boundaries (LOB) domain 11 108 IPR004883 -
Mupr17101g00001 177 Coils Coil 90 117 - -
Mupr17101g00001 177 ProSiteProfiles LOB domain profile. 10 111 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr17101g00001 Mupr-Chr17101 2384 3536 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr17101g00001 1 138 AS2 family AT3G11090 65.278 8.65e-66 197
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Mupr17101g00001 LOB 4.6e-38 No_clan