Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr17092g00001 ATGAAGATCCAGTGCGATGTCTGTAACAAAAACCAGGCTTCATTATTCTGCACCGCCGATGAAGCCGCCCTATGCGACTCCTGCGACCACCGCGTCCACCATGCCAACAAACTCGCCTCCAAACACCATCGTTTCTCTCTCACACACCCTTCCGCAAAGCATTTTCCTGTCTGTGATGTTTGCCAGGAGAGAAGAGCCTTTGTGTTTTGTCAGCAAGATAGAGCCATTCTGTGCAAAGAGTGTGACGCGTCCATTCATTCTGCCAACGACCTCACAAAGAAGCATAGCAGGTTTCTTCTCACTGGGATCAAGTTCTCTGATACCGCCACGCCTTATACTCCATCACCCAACAAAAACCCTCTTCTCGATTCTCCTCCTTCAACACCCTCACCCCCTAAGTCTGGGGGAAACTCGCTTACAAATCAAGAACCTGTTTTCGCAGGTAGCAGCATATCAGAGTACTTGATCAATACTATCCCCGGCATGAAGTTCGAAGATTTCCTCGATTCACATTCCCTTCCCTTTGCTCTCTCTAAGAACGGTGATGAGATGTGGTCGGCGTTTGATGAGGGAAAGATGGTGTCGTTATGGCCGAGTGGGATGTGGGTTCCTCAAGCGCCATCTTCATCTGTATATTCCGTACAAATGGATCAAGAGAATGGGTACAGAGAGACAAGGGATGGAATTGGAAACAGTAGATCAAGTTTGGGGGATGATAATTTCTTAGTTCCACAGATGAGCCCTCCCAACAACGTCTCCAAGAGATCCAGATTTCTA 777 0.4801 MKIQCDVCNKNQASLFCTADEAALCDSCDHRVHHANKLASKHHRFSLTHPSAKHFPVCDVCQERRAFVFCQQDRAILCKECDASIHSANDLTKKHSRFLLTGIKFSDTATPYTPSPNKNPLLDSPPSTPSPPKSGGNSLTNQEPVFAGSSISEYLINTIPGMKFEDFLDSHSLPFALSKNGDEMWSAFDEGKMVSLWPSGMWVPQAPSSSVYSVQMDQENGYRETRDGIGNSRSSLGDDNFLVPQMSPPNNVSKRSRFL 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr17092g00001 259 MobiDBLite consensus disorder prediction 118 132 - -
Mupr17092g00001 259 CDD Bbox1_BBX-like 5 47 - -
Mupr17092g00001 259 ProSiteProfiles Zinc finger B-box type profile. 1 47 IPR000315 GO:0008270
Mupr17092g00001 259 PANTHER B-BOX ZINC FINGER PROTEIN 22 1 249 - -
Mupr17092g00001 259 MobiDBLite consensus disorder prediction 227 259 - -
Mupr17092g00001 259 FunFam B-box zinc finger protein 21 1 98 - -
Mupr17092g00001 259 Pfam B-box zinc finger 56 96 IPR000315 GO:0008270
Mupr17092g00001 259 Pfam B-box zinc finger 4 42 IPR000315 GO:0008270
Mupr17092g00001 259 ProSiteProfiles Zinc finger B-box type profile. 53 100 IPR000315 GO:0008270
Mupr17092g00001 259 CDD Bbox1_BBX-like 57 100 - -
Mupr17092g00001 259 MobiDBLite consensus disorder prediction 110 142 - -
Mupr17092g00001 259 Gene3D Classic Zinc Finger 1 96 - -
Mupr17092g00001 259 SMART bboxneu5 53 100 IPR000315 GO:0008270
Mupr17092g00001 259 SMART bboxneu5 4 47 IPR000315 GO:0008270
Mupr17092g00001 259 MobiDBLite consensus disorder prediction 223 259 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr17092g00001 Mupr-Chr17092 183 1225 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr17092g00001 1 249 C2C2-CO-like Transcription Factor Family AT1G75540 40.673 8.87e-67 208
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF DBB Mupr17092g00001 zf-B_box 3.4e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr17092g00001 - - gmx:100785978 401.749