Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr17087g00001 ATGAACAAAACTCATGCTGCACCTGCTTCTGCTTCCTCCACGTCGCTCCAATCCAAAAGTTTCCTTCCCCATCATCATACCATAACATCATACAAGTCTACATTCACTCTAGCAGCTGAGAAAGTCTCATCACAAGGTCAAAGTCAAAGGCAAGCCCATCTTGTTTCTCAGGAAGAATTAAGAAAGCTCCATATATATTCCTATATGGATCCTCATGGTCGAGTGAAGGACGAGTTTCTTGGAGAAAGTTCTTCCTTTTGTGGAGACTATGATCAGCAGCCATTCATGGTTGTTCCTCAACCAATTGAGGGGCTTCACGAAACTGGTCCTCCACCATTCCTCACAAAAACATACGACATCGTTGATGACCCTTCCACAAACCATATTATTTCCTGGAGCACAGGGAACAACAGCTTCATTGTGTGGGATCCCCAGGCCTTTTCCGTAACCCTTCTCCCCAGATTCTTCAAGCACAACAATTTCTCCAGTTTTGTCAGGCAACTCAACACCTATGGGTTTAAAAAGATGGATCCAGATAGGTGGGAGTTTGCTAATGAGATGTTTCTCAGAGGACAAAGGATTCTTTTGAAGAACATTAGAAGGAGGAAAGCAAACCAGCAATCTCAGGCGATGCAGCAAGGCGTAGAGCCTTGTCTTGAGGTGGGGCAGTTTGGATTAGATGGAGAAGTTGATCGGTTGAGGCGTGACAGGCAAGTTCTGATGGTGGAGTTGGTGAAACTCAGACAACAGCAACAGAATACCAGATCTCACCTTCAAGCAATGGAAGGCAGGCTCAAAAGGACTGAAAAGAAACAGCAACAGATGATGAATTTCTTGGCCAGGGCAATGCAAAACCCCAACTTCGTGCAACAATTGGTTCAGCACAAGGAGTGGAGAAAGGAGCTCGAGGAAGCTTTTTCCAACAAGAGGAGGAGGCCTATTGATCAAGGGCCTAGTAATGTTGATGATGAAGTAGGTTCTGCTGAAGAGTGTTCAACTTCCGTTAAACTTGAACCGCAGGAATACACTGACAAGGTATTAAAGTTTGAGGTACCTGATCTAGACCTTGCTTTGAATCTTGATGAGCAAAGTGGAAGTCAAAAGAAAATGGAGGAAGACCATATTCAACTTGAAAGTAGGGATAAAGATATTGATGAAGTGTTTTGGCAAGAATTGCTTAATGAGGCTATTGAAGATCAAAGCGTACTAGGTGTTGAAGATGTATTGGCTGAGCAACTT 1239 0.4374 MNKTHAAPASASSTSLQSKSFLPHHHTITSYKSTFTLAAEKVSSQGQSQRQAHLVSQEELRKLHIYSYMDPHGRVKDEFLGESSSFCGDYDQQPFMVVPQPIEGLHETGPPPFLTKTYDIVDDPSTNHIISWSTGNNSFIVWDPQAFSVTLLPRFFKHNNFSSFVRQLNTYGFKKMDPDRWEFANEMFLRGQRILLKNIRRRKANQQSQAMQQGVEPCLEVGQFGLDGEVDRLRRDRQVLMVELVKLRQQQQNTRSHLQAMEGRLKRTEKKQQQMMNFLARAMQNPNFVQQLVQHKEWRKELEEAFSNKRRRPIDQGPSNVDDEVGSAEECSTSVKLEPQEYTDKVLKFEVPDLDLALNLDEQSGSQKKMEEDHIQLESRDKDIDEVFWQELLNEAIEDQSVLGVEDVLAEQL 413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr17087g00001 413 ProSitePatterns HSF-type DNA-binding domain signature. 152 176 IPR000232 GO:0003700|GO:0006355|GO:0043565
Mupr17087g00001 413 SUPERFAMILY "Winged helix" DNA-binding domain 109 202 IPR036390 -
Mupr17087g00001 413 FunFam Heat shock transcription factor 1 106 203 - -
Mupr17087g00001 413 Pfam HSF-type DNA-binding 113 202 IPR000232 GO:0003700|GO:0006355|GO:0043565
Mupr17087g00001 413 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 99 333 IPR027725 -
Mupr17087g00001 413 Coils Coil 230 250 - -
Mupr17087g00001 413 Gene3D - 105 203 IPR036388 -
Mupr17087g00001 413 PRINTS Heat shock factor (HSF) domain signature 151 163 IPR000232 GO:0003700|GO:0006355|GO:0043565
Mupr17087g00001 413 PRINTS Heat shock factor (HSF) domain signature 113 136 IPR000232 GO:0003700|GO:0006355|GO:0043565
Mupr17087g00001 413 PRINTS Heat shock factor (HSF) domain signature 164 176 IPR000232 GO:0003700|GO:0006355|GO:0043565
Mupr17087g00001 413 SMART hsfneu3 109 202 IPR000232 GO:0003700|GO:0006355|GO:0043565
Mupr17087g00001 413 MobiDBLite consensus disorder prediction 309 333 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr17087g00001 Mupr-Chr17087 554 2413 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr17087g00001 96 396 HSF AT3G22830 57.357 2.16e-123 362
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Mupr17087g00001 HSF_DNA-bind 2.5e-31 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr17087g00001 K09419 - gmx:100809515 585.489