Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr17080g00001 ATGGCCTCTCCCACTCCTCCCTCCGATCCCCCCTCCGCTCTCCCCCTTGCCCTCCCTGCACCTCCCTCCTCCCGCCGCCTCCCTCCGCCGTGCTGGTCTCCCGACGAAACCCTCGCCCTCATAGACGCTTACCGCGACAAGTGGTACTCCCTTGGCCGCGGCAACCTCAAGGCCACTCACTGGCAAGAGGTTGCTGACGCTGTCTCCCACCGCTGTCCCAACGCCTCCCCCCCCAAAACCCCTGTTCAGTGTCGTCACAAGATGGAGAAGCTCCGCAAGCGCTACCGCACCGAGATCCAACGCGCTCGCTCCCTCCCCGTTGCCCGATTCAACTCTTCCTGGGTTCACTTCAAGCTTATGGACTCCATGGAAAAAGGTCCCTCTCCTGTCAAACCCGAAAATGATTCCGACAGTGACGACAACGATGACGATGACGACAACGATCAAGATCTGTACCAGGAGATCAACCACAACGGTCACACCAGGAGCTTGAACAAGTTGTATCGAAATGGATTTCCGGGTTCTGGTGCCGCTGCCGCTGCCGCTGCCGGTGGGTTTAGGATTCGAATTCCTACCGGGTTGGGCGCAGTTCCACCTGGATCTGGCTCCAAGGTATTTGGAAAGGCTGGAAATCAGAAATTCAGCCCCAATTTGAATCAAAACCCTAACCCTAATTTCGGAAAGAAGAGGGAGAGAGACCCCATAGGAGAGGTGGTGGCTGCGATTAAGGTTTTGGGAGATGGATTTGTGAGAATGGAACAGATGAAGATGGAGATGGCAAGAGAGATTGAAACCATGCGAATGGAGATGGAAATGAAGCGCACTGAGATGATTCTGGAGTCACAACAGCGGATTGTCGAGGCCTTTGCCAAGGCAGTTTCCGATAAGAAAAAGAAGCCTATGACTCTATTTTGCTTTGTTGTTGCCACTTTTTTTGTAATTTTAAGAGCATGA 954 0.5377 MASPTPPSDPPSALPLALPAPPSSRRLPPPCWSPDETLALIDAYRDKWYSLGRGNLKATHWQEVADAVSHRCPNASPPKTPVQCRHKMEKLRKRYRTEIQRARSLPVARFNSSWVHFKLMDSMEKGPSPVKPENDSDSDDNDDDDDNDQDLYQEINHNGHTRSLNKLYRNGFPGSGAAAAAAAGGFRIRIPTGLGAVPPGSGSKVFGKAGNQKFSPNLNQNPNPNFGKKRERDPIGEVVAAIKVLGDGFVRMEQMKMEMAREIETMRMEMEMKRTEMILESQQRIVEAFAKAVSDKKKKPMTLFCFVVATFFVILRA 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr17080g00001 317 Coils Coil 85 105 - -
Mupr17080g00001 317 Gene3D - 32 97 - -
Mupr17080g00001 317 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASIL2 12 295 IPR044823 -
Mupr17080g00001 317 MobiDBLite consensus disorder prediction 1 29 - -
Mupr17080g00001 317 MobiDBLite consensus disorder prediction 209 225 - -
Mupr17080g00001 317 MobiDBLite consensus disorder prediction 136 150 - -
Mupr17080g00001 317 ProSiteProfiles Myb-like domain profile. 32 92 IPR001005 -
Mupr17080g00001 317 Pfam Myb/SANT-like DNA-binding domain 30 123 IPR044822 -
Mupr17080g00001 317 MobiDBLite consensus disorder prediction 209 231 - -
Mupr17080g00001 317 FunFam Trihelix transcription factor ASIL2 32 97 - -
Mupr17080g00001 317 SMART 118neu2 39 128 IPR006578 -
Mupr17080g00001 317 MobiDBLite consensus disorder prediction 123 159 - -
Mupr17080g00001 317 MobiDBLite consensus disorder prediction 1 30 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr17080g00001 Mupr-Chr17080 2957 4961 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr17080g00001 3 123 Trihelix Transcription Factor Family AT3G14180 34.307 7.40e-17 79.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Mupr17080g00001 Myb_DNA-bind_4 5.5e-21 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr17080g00001 - - vun:114179736 472.241