Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr17074g00001 ATGTTTCCCCGTCCATGGATCTCGATAGTCACAGTCAGTGCAATTTCACTGCTCGTGTGCTCACTGGTTAAGTCCTTTCCAGAAGCTGATAAGGTGAAATCCTTGCCTGACCACTCACCTGTTTCTTTCCAACAATTTGCTGGCTATATACCCCTTGATGACAAGAATCATAGAGCTCTTTTTTACTACTTTGTTGAAGCAGAAACCGACCCTGCTTCCAAGCCTCTAGTTCTCTGGCTAAATGGAGGGCCTGGTTGTACATCCGTTGGAATTGGAGCCTTCACCGAACATGGTCCTTTTGTTACAAATCAAGGAGAGGCTATAAAGAAAAACCAGTATAGTTGGAACAAAGAGGCAAACATTTTGTACTTGGAGTCACCGGCAGGTGTTGGATTCTCTTACTCTCTCAATTTGTCATTTTATAAAACACTGAACGATGAGGTCACAGCCCGAGACAATCTGGTTTTCCTGCAGCGTTGGTTTGCTAAGTTCCCAGAATACATGAATAGAGATTTTTATATAATGGGAGAGAGTTATGGAGGTCACTATGTACCCCAACTTGCTGAACTCATTATTAAGAGTAAAGTGAATTTCAACCTAAAGGGCATAGCAATAGGAAATCCTCTTCTGGATTTTGATACTGATATGAATGCAGAAGATGAATATTACTGGTCTCATGGAATTATATCTGATTATGCTTACAAAATCAAGACCTCTCTATGTAACTCGTCTAGATCATTAAGAGAACTCTTTAGGGATCAATTATCCAACGGTTGTCTTCTTGCAGCTCGAAAACTCTCAGAAGAATATTCTTTTATACCTTTCATTGACGAATATTATGTTATTGGCGACAGATGTCTTTCTTACAATGTTTCTCAGGCAGGTTTTCTTAGGGAGATGCTAAATTCAAGAATGTTTCAGTTTAGGAATCAGCAAAATGAAGAACCTGACCAGCAAATTGATAAGTGTAATATGAAATATTCAGAGATGTACTTGAACAGGAAAGATGTGCAGAAGGCTCTCCATGCCCGTCTGGTGGGAACTACCAATTATCATTTGTGCAGCAAGATTGTACTAATGAATTACGATCCGTTGAACAGAGAGATACCAACGATTAATGTTGTAGGCTTCCTTGTAAAATCAGGTCTTCGAGTCATCATTTACAGTGGGGATCAAGACTCTGTGATTCCATTCATGGGCACGAGAAGATTGGTTGATGGACTAGCAAAGAAACTAGGACTTAAAACAACCATGCCGTACAGTGCCTGGTTTGTGGACAAGCAGGTTGGAGGATGGACACAAGTTTATGGCAATCACCTCACGTTTGCCACAGTAAGAGGAGCTTCACATGGCACGCCAGCTACTCAACCAAAGAGTTCTTTTCTTTTGTTTAATGCGTTTCTTCAAGGGAAACCACTCCCTAAAGCATGA 1431 0.4074 MFPRPWISIVTVSAISLLVCSLVKSFPEADKVKSLPDHSPVSFQQFAGYIPLDDKNHRALFYYFVEAETDPASKPLVLWLNGGPGCTSVGIGAFTEHGPFVTNQGEAIKKNQYSWNKEANILYLESPAGVGFSYSLNLSFYKTLNDEVTARDNLVFLQRWFAKFPEYMNRDFYIMGESYGGHYVPQLAELIIKSKVNFNLKGIAIGNPLLDFDTDMNAEDEYYWSHGIISDYAYKIKTSLCNSSRSLRELFRDQLSNGCLLAARKLSEEYSFIPFIDEYYVIGDRCLSYNVSQAGFLREMLNSRMFQFRNQQNEEPDQQIDKCNMKYSEMYLNRKDVQKALHARLVGTTNYHLCSKIVLMNYDPLNREIPTINVVGFLVKSGLRVIIYSGDQDSVIPFMGTRRLVDGLAKKLGLKTTMPYSAWFVDKQVGGWTQVYGNHLTFATVRGASHGTPATQPKSSFLLFNAFLQGKPLPKA 476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr17074g00001 476 Pfam Serine carboxypeptidase 39 470 IPR001563 GO:0004185|GO:0006508
Mupr17074g00001 476 Gene3D alpha/beta hydrolase 23 474 IPR029058 -
Mupr17074g00001 476 SUPERFAMILY alpha/beta-Hydrolases 37 474 IPR029058 -
Mupr17074g00001 476 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 32 457 IPR001563 GO:0004185|GO:0006508
Mupr17074g00001 476 ProSitePatterns Serine carboxypeptidases, serine active site. 174 181 IPR018202 GO:0004185
Mupr17074g00001 476 PRINTS Carboxypeptidase C serine protease (S10) family signature 160 185 IPR001563 GO:0004185|GO:0006508
Mupr17074g00001 476 PRINTS Carboxypeptidase C serine protease (S10) family signature 440 453 IPR001563 GO:0004185|GO:0006508
Mupr17074g00001 476 PRINTS Carboxypeptidase C serine protease (S10) family signature 111 123 IPR001563 GO:0004185|GO:0006508
Mupr17074g00001 476 PRINTS Carboxypeptidase C serine protease (S10) family signature 124 134 IPR001563 GO:0004185|GO:0006508
Mupr17074g00001 476 FunFam Carboxypeptidase 25 474 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr17074g00001 Mupr-Chr17074 1809 5391 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr17074g00001 328 473 Calmodulin-binding Proteins AT2G22960 27.815 9.15e-15 70.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr17074g00001 K16297 - gmx:100819443 841.647