Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr17067g00001 ATGGACTTTGGAGGGAACAACATGTTTGGTCTCAACAACCACACCAAAGAGGAAAACGGAAACACCAGCACTAACAACAACAATAACAGTACTATTGTTAATGTTTGGTATTCTTCATGGGAACCTACTACGGCGGCGGAGAGCTACGGCAGCGGAGGACAACGGCGCCACCAGCAGCTGTACGGCGGAGACGGGTGTCACGTGCAGGCGGACCCTCACCTCACGTGCTTGCATCTCGGCAAGAGACATTACTTCGAGGATGCTAATAATGTTGGTGGCCCTTTGGGGAACCGACACGTGTGCGGTGGTGGGGGGTTTGGGTTGGAGGGTAACGATAAGAGACCAAGAGGGTATTGTGGCGGAGGAACGGCGGCGGGTGGCGGCGGGAAAACGGCGGCGTTTGCCATGGTTCCTCGATGTCAGGTTGAGGGGTGCCACGTGGCGCTGATGAACGCCAAGGAGTACCACAGGAGGCACAGAGTTTGTGATATGCATTCCAAGGCGCCCAAAGCTGTGGTCTTGGGCTTGGAGCAGAGATTCTGTCAGCAGTGTAGCAGGTTTCATGTGGTATCAGAGTTTGATGACTCAAAGAGGAGTTGTAGGAGGAGACTTGCGGGCCATAATGAGCGAAGAAGAAAGAGCTCTCACCTTTCTGTTACCAGAAATTCTAGACAAGGGTGTGCTCTCTCTCTTCTGTCATCAACCGGGAGTGAGTCTTGGCTTTCTCACGCTGATCTGTCGACAAGATGCAGCGCAGCATTGAGTGAATTGATAGCAGAAAACCGTGCTGCCCTCATGACTAGACAACAACCTCAACAACATCTTGTTTATGATAGAGACTGGCATGTTCTTATGCCCCACCATGCACTAGTGGAAGAAGATGAGCAAGACTTTGAGGACATGCAACAACCTCAGTCCAATTATTATCCACAACACATGTTTCCCCAGACATAA 954 0.5126 MDFGGNNMFGLNNHTKEENGNTSTNNNNNSTIVNVWYSSWEPTTAAESYGSGGQRRHQQLYGGDGCHVQADPHLTCLHLGKRHYFEDANNVGGPLGNRHVCGGGGFGLEGNDKRPRGYCGGGTAAGGGGKTAAFAMVPRCQVEGCHVALMNAKEYHRRHRVCDMHSKAPKAVVLGLEQRFCQQCSRFHVVSEFDDSKRSCRRRLAGHNERRRKSSHLSVTRNSRQGCALSLLSSTGSESWLSHADLSTRCSAALSELIAENRAALMTRQQPQQHLVYDRDWHVLMPHHALVEEDEQDFEDMQQPQSNYYPQHMFPQT 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr17067g00001 317 FunFam Squamosa promoter-binding-like protein 14 131 201 - -
Mupr17067g00001 317 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 44 267 IPR044817 GO:0003677
Mupr17067g00001 317 ProSiteProfiles Zinc finger SBP-type profile. 137 214 IPR004333 GO:0003677
Mupr17067g00001 317 MobiDBLite consensus disorder prediction 8 28 - -
Mupr17067g00001 317 Gene3D - 132 201 IPR036893 GO:0003677|GO:0005634
Mupr17067g00001 317 MobiDBLite consensus disorder prediction 1 28 - -
Mupr17067g00001 317 Pfam SBP domain 140 213 IPR004333 GO:0003677
Mupr17067g00001 317 SUPERFAMILY SBT domain 138 216 IPR036893 GO:0003677|GO:0005634
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr17067g00001 Mupr-Chr17067 11666 15054 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr17067g00001 137 220 SBP-box Gene Family AT2G42200 69.048 5.61e-35 129
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SBP Mupr17067g00001 SBP 1.8e-30 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr17067g00001 - - gmx:100816072 462.225