Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr1705g00001 ATGTCTGATCCCATTGATAGATCAGCACCGAAACTATTTGGTTTCCCACTAAGAGAGCAAGAGGAAGAAGTTGGAGAAAGGAAAAACGAGGTCGGAGAGGAGAGAAAGTTCAGGTGCCACTACTGCAGGAGAACATTCGCGAACTCGCAGGCCTTAGGGGGACACCAAAACGCTCACAAGAAAGAGCGACAGAAGGCAAGGCGTTTCCAAATCCAGACTCACCAAACACATAGACGCTCTTCTTCTGCTCATCCACTTGTCACCGCACATGCAATCAGAACATTACCCTCATTTTACTTCCAAGCCCCTTCTACCGCCACTCCTCTACCCTGCTTCCCTTTTCACCTTTATGCGTCACCCTCTCTACTGCAATCTCCTCCTACCGTCCGCCATTTTTCTCAAGACAATGTTGATGTCCATCTCAAATTATAA 432 0.4769 MSDPIDRSAPKLFGFPLREQEEEVGERKNEVGEERKFRCHYCRRTFANSQALGGHQNAHKKERQKARRFQIQTHQTHRRSSSAHPLVTAHAIRTLPSFYFQAPSTATPLPCFPFHLYASPSLLQSPPTVRHFSQDNVDVHLKL 143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr1705g00001 143 FunFam Zinc finger protein 6 25 93 - -
Mupr1705g00001 143 ProSiteProfiles Zinc finger C2H2 type domain profile. 37 64 IPR013087 -
Mupr1705g00001 143 ProSitePatterns Zinc finger C2H2 type domain signature. 39 59 IPR013087 -
Mupr1705g00001 143 Gene3D Classic Zinc Finger 19 90 - -
Mupr1705g00001 143 MobiDBLite consensus disorder prediction 16 30 - -
Mupr1705g00001 143 PANTHER ZINC FINGER PROTEIN 5 8 121 IPR044299 GO:0010090
Mupr1705g00001 143 MobiDBLite consensus disorder prediction 1 30 - -
Mupr1705g00001 143 SUPERFAMILY beta-beta-alpha zinc fingers 33 64 IPR036236 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr1705g00001 Mupr-Chr1705 7511 7942 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr1705g00001 11 74 C2H2 Transcription Factor Family AT5G06650 43.836 1.80e-15 68.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Mupr1705g00001 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr1705g00001 - - aprc:113861015 166.392