Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr17055g00002 ATGGATGGGAGGCTTGGGGTGCCGATTCTGATGAGTTTAGTGCTTTCTTATTTGCCAGAGGCTGCAAAGGAGTGCGGAATAATTCTGGATACGGTTGAATCTGCTCTTCCTAATGGAATGCCTGAGGGTGTTGGTGAAGATTGTAAGTTGCAAGAGATGTTTCATAAAGCATTGGAGTTGCTTCCATGCCTTTGGATCAGGGCAGGGTTTCTAGATGAAGCTGTCACTGCATATCGTCGTGCTCTGGTCAAGCCATGGAATTTGGAGCCACGAAGGTTGGCTGCTGTGCAAAAAGATTTAGCTACGATACTACTCTATGGTGGTGTTGAAGTAAGCCTACCTTCTCAGTTGCAGGTGGGGGTTGAGACAACACCCAAGAGTAGTGTTGAAGAAGCAATACTTTTGCTATTAATACTCATGATCAAGGTGGCAAATCAGGAAATAGACTGGGATGCTGAAATAATGGATCATCTTACGTTTGCACTTTCAGTTACTGGGATGTTTGAGTTATTGGCAGATCATATAGAGCAGATCCTTCCAGGTATCTATAGTCGAGTTGAGAGGTGGTACTTTCTTGCTCTGTGTTATAGTGCAGCAGGACATAACGAGGTAGCATTGAACCTTTTGAGGAAGGCTTGTGGCAGTTCTGAAGCAAACCATAGACCCCATTTTCCTTCATTTTTGTTTGGAGCAAAACTCTGTTCCCTATATCCTTGCCATGCTCATGAAGGTATTAAATTTTCACATGGAGTTATTGATCTAGCTAAGCACCAAAATGAGCATTTTCTGGGTCATGGCCACAAATTTCTTGGCATGTGCTACGGGGCTGCAGCTAGAATTTCTTTATTGGATTCTGAAAGAAGTATATTTGAAAGAGAGTCTTTGAATTCTCTAAACTGTGCTGCTGTAAATGGAAATGATGACCTGGAAGTGGTATTCAGCCTTGGACTGGAAAATGCAATTCATAGGAATCTGGATGCAGCTTACAACAATATAATGATGTACTCAGACATGACTGTTGGCAGTTCAAGAGGTTGGCAGCTGTTAGCACTCATAGTATCTGCACAGCAGCGGTTTAAGGATGCTGAAACTGTAGTTGATTTTGCTTTAGATGAGTCTGGGGGGATGGATCAACTTAAACTTCTAAGATTGAAAGCAGTACTTCAAATTGCTCAGGAGCAACCCAAGCAAGCAATAGAGACATATAGGATCTTGCTAGCACTAATTCAAGCGAAAAAAGAGCTTTGGCTTGAAGATAACAACTTTGATCAACAAGAAGCATTCAGGCGTGAGGCATTAACAGAAAGGAAGTTGGAAATGGAAGCCTGGCAGGATTTGGCTACCATTTATACGGATGTTGGTTCCTTGCTCGATGCAAAAGCTTGTGTTGACAAAGCCCAGGTGATAGAATTTTTTTCTCCTGGAAGTTGGCATATTACAGGGATGTTGCTTGAAGCTCAATCGCTATACAAAGAGGCATTTGTTTCCTTTTCAGTATCATTGTCAATAGAACCAGATTATATTCCCAGTATCATATCGACTGGAGAATTGTTGATGAAACTTGGTATGCAATCGCTTCCAATTGCAAGAAGCTTTTTAATGAATGCTTTGCGATTAGAACCTACAAACCATGATGCTTGGTTCAAACTTGGATTGGTTTCAAAAATGGAAGGTTCATTACAGCAAGCAGCAGAGTTCTTTCAAGCTGCTTATGAACTGAAGCTTTCTGCTCCAGTGCAAAAATTTAATTGA 1752 0.415 MDGRLGVPILMSLVLSYLPEAAKECGIILDTVESALPNGMPEGVGEDCKLQEMFHKALELLPCLWIRAGFLDEAVTAYRRALVKPWNLEPRRLAAVQKDLATILLYGGVEVSLPSQLQVGVETTPKSSVEEAILLLLILMIKVANQEIDWDAEIMDHLTFALSVTGMFELLADHIEQILPGIYSRVERWYFLALCYSAAGHNEVALNLLRKACGSSEANHRPHFPSFLFGAKLCSLYPCHAHEGIKFSHGVIDLAKHQNEHFLGHGHKFLGMCYGAAARISLLDSERSIFERESLNSLNCAAVNGNDDLEVVFSLGLENAIHRNLDAAYNNIMMYSDMTVGSSRGWQLLALIVSAQQRFKDAETVVDFALDESGGMDQLKLLRLKAVLQIAQEQPKQAIETYRILLALIQAKKELWLEDNNFDQQEAFRREALTERKLEMEAWQDLATIYTDVGSLLDAKACVDKAQVIEFFSPGSWHITGMLLEAQSLYKEAFVSFSVSLSIEPDYIPSIISTGELLMKLGMQSLPIARSFLMNALRLEPTNHDAWFKLGLVSKMEGSLQQAAEFFQAAYELKLSAPVQKFN 583
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr17055g00002 583 SMART tpr_5 343 376 IPR019734 GO:0005515
Mupr17055g00002 583 SMART tpr_5 474 507 IPR019734 GO:0005515
Mupr17055g00002 583 SMART tpr_5 186 219 IPR019734 GO:0005515
Mupr17055g00002 583 SMART tpr_5 544 577 IPR019734 GO:0005515
Mupr17055g00002 583 SMART tpr_5 379 412 IPR019734 GO:0005515
Mupr17055g00002 583 PANTHER PROTEIN NPG1 17 583 IPR043376 -
Mupr17055g00002 583 SUPERFAMILY TPR-like 431 574 IPR011990 GO:0005515
Mupr17055g00002 583 ProSiteProfiles TPR repeat profile. 544 577 IPR019734 GO:0005515
Mupr17055g00002 583 Gene3D Tetratricopeptide repeat domain 292 579 IPR011990 GO:0005515
Mupr17055g00002 583 SUPERFAMILY TPR-like 186 467 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr17055g00002 Mupr-Chr17055 1896 4312 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr17055g00002 20 582 Calmodulin-binding Proteins AT1G27460 54.064 0.0 620
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr17055g00002 K21843 - gmx:100780807 978.393