LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mupr17047g00001	ATGGCTGGAGAAACGAAAGAAGGTTCGGTTTCGGAGATGTCTCTGAAGGATCAGGGCAACGAGTTTTTCAAGTCTGGAAAGTTTCTCAAAGCTGCTGCACTCTACACTCAAGCCATCAAGCTTGACCCTTCTAACCCTACTCTCTATAGTAATCGAGCTGCAGCATTGCTTCAATTAGATAAGCTTAATAAAGCTCTTGATGATGCTGAGATGACAATCAAATTAAAACCCCAATGGGAAAAGGGATATTTCAGGAAGGGAAGCATATTGGAGGCCATGAAACGATACGATGATGCTTTAGCTGCCTTTCAGATAGCATTGCAGTATAACCCACAAAGTCAAGAAGTATCAAAAAAGATAAAGAAGATAAACCAACTGGTGAGAGATAGCAAGCGGGCTCAAGAAGTGGAGAATATGAGATCCAATGTTGACATGGCCAAACATTTAGATGCATTGAAACCTGAAATGTCTGGAAAGTATGGATCTGAAGAATGCTGGAAAGATATGTTCTTATTCCTTGTTGAGACTATGGAGACTGCTGTAAAATCATGGCATGAAACTTCTTCGGTGGATGCTAGAGTTCACTTTCTTCTTGATAAGGAAAAGACACAGACTGATAAGTATGCCCCAATTGTGAATATTGATAAGGCCTTTGAATCACCACATACACATAGCAACTGCTTTCCATTTCTTAGGCAGTATGCGGAGGAGTCTTTCTCCAAAGCAGCCTGCCTGGTGACTCCCAAAAGCATCATTGCTTATCCACAGATTGCCTGCTTTTCTACTCATTCTGTTAGAATTGTGAAGCCTGAATGTCTGCAGAATCTATTAATGACATTCTATGCCTGCAGGTCTGGAAGGGCCAAGGATCAAGAAAGTGGAAACATGCCCAGAGTGATGGTTTCTTTGTTCAATTTGAGTCACCTTCCCTGCGAAAGCTGTGGTTTATACCCAGTTCAAATGAAAAGGGACAGACATTGTGCAGGGATCCAGAGGTTTTGGACATTGGTGCTCATGAAGTTGTTCCCCGGTTATACAAATAAAAGCCGCCCCGATCTTGATAATGCAAGAGTTGCAGAGGATATTCCAGAAGCTCAGGACCTCTGGTTGGTTGAGTTGAGTGGTTTCAATTAA	1134	0.4215	MAGETKEGSVSEMSLKDQGNEFFKSGKFLKAAALYTQAIKLDPSNPTLYSNRAAALLQLDKLNKALDDAEMTIKLKPQWEKGYFRKGSILEAMKRYDDALAAFQIALQYNPQSQEVSKKIKKINQLVRDSKRAQEVENMRSNVDMAKHLDALKPEMSGKYGSEECWKDMFLFLVETMETAVKSWHETSSVDARVHFLLDKEKTQTDKYAPIVNIDKAFESPHTHSNCFPFLRQYAEESFSKAACLVTPKSIIAYPQIACFSTHSVRIVKPECLQNLLMTFYACRSGRAKDQESGNMPRVMVSLFNLSHLPCESCGLYPVQMKRDRHCAGIQRFWTLVLMKLFPGYTNKSRPDLDNARVAEDIPEAQDLWLVELSGFN	377

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mupr17047g00001	377	ProSiteProfiles	TPR repeat profile.	80	113	IPR019734	GO:0005515
	Mupr17047g00001	377	Pfam	TPR repeat	19	59	-	-
	Mupr17047g00001	377	PANTHER	TPR REPEAT CONTAINING PROTEIN	9	257	-	-
	Mupr17047g00001	377	Pfam	Tetratricopeptide repeat	81	112	IPR013105	-
	Mupr17047g00001	377	SMART	tpr_5	46	79	IPR019734	GO:0005515
	Mupr17047g00001	377	SMART	tpr_5	80	113	IPR019734	GO:0005515
	Mupr17047g00001	377	SMART	tpr_5	12	45	IPR019734	GO:0005515
	Mupr17047g00001	377	FunFam	serine/threonine-protein phosphatase 5	11	125	-	-
	Mupr17047g00001	377	SUPERFAMILY	TPR-like	14	123	IPR011990	GO:0005515
	Mupr17047g00001	377	ProSiteProfiles	TPR repeat profile.	12	45	IPR019734	GO:0005515
	Mupr17047g00001	377	Gene3D	Tetratricopeptide repeat domain	12	125	IPR011990	GO:0005515
	Mupr17047g00001	377	Coils	Coil	52	72	-	-

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mupr17047g00001	8	123	U-box Gene Family	AT3G07370	28.814	4.91e-07	48.9

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mupr17047g00001	-		-	gmx:100790717	474.937