Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr17035g00001 ATGGAGATTCGCTCTGCCTCAAATAAAAACATAAATGATTACACTCTTCCCGCAGTTGTCGTCGAAAAATCACATCCCATAAGGCAACGGATTGCGTTGCCCCAACCTCTCAATTTACCTAACCTTATTGTCTCTCAGACTTTGAATCCGCCCAATGTCAAGAAACCATCTCCCACAAACAATACCCTTTCTTCCCCCAAGATTGATGAATCTTATGTTTCTGACATCTACGAGTATTTACGTGCAATGGAGAAAAAGAGAAGACCAATAGTTGATTATATGGAGAAAGTTCAGAAAGAAATTACTGCACCCATGAGAGCAACGTTGATGGATTGGTTAGTAGAGGTAGCAAAGGATTACCAACTTTGCCCTGATACTCTTCATCTTTCTGTTTCATATATTGATAGATTTTTATCTATCAATTCTATGAGCAAAATGAGGTTTCGGTTGCTGGGTGTTTCCTCTTTGTTTATTGCTTCTAAGTACGAGGAAATTGACCCACCTTATGTGGATCAACTTTGTGACGTTACTGAGAACACTTTTAATAAAGAAGAGGTTATAAAGATGGAAGCAGATATACTTAAGTTTTTACAATTTGAAATGGGAAATCCTACTATAAATACCTTTCTAAAGATATTTGTTAGTGTTGTTTCTGAGAACCAAAAAATTGAATATTTGGGCAGCTATCTTGCTGAGCTAAGTTTGTTGGACTATGATTGTTTAAGATTTCTGCCTTCTATTGTGGCTGCGTCAGTTATATTTCTTGCTAGATTTATTATCACACCTGAAGTGCATCCTTGGAGTTTTGTCTTGAGGGAATGTTCGGGTTACGAATCAGTTGAGTTAAAAGAATGTGTTCTCATCTTGTATGATTTGTTTTTGTCAAGAAAGACGGTATCATCTAAAGCTGTTAGGGAGAAATACAAGCATCAGAAGTTCAACTACGTCGCAAACCTGTCTCCTCCCACATATATACCAAGTGATTACTTTGAAGAGCATTGA 1002 0.3713 MEIRSASNKNINDYTLPAVVVEKSHPIRQRIALPQPLNLPNLIVSQTLNPPNVKKPSPTNNTLSSPKIDESYVSDIYEYLRAMEKKRRPIVDYMEKVQKEITAPMRATLMDWLVEVAKDYQLCPDTLHLSVSYIDRFLSINSMSKMRFRLLGVSSLFIASKYEEIDPPYVDQLCDVTENTFNKEEVIKMEADILKFLQFEMGNPTINTFLKIFVSVVSENQKIEYLGSYLAELSLLDYDCLRFLPSIVAASVIFLARFIITPEVHPWSFVLRECSGYESVELKECVLILYDLFLSRKTVSSKAVREKYKHQKFNYVANLSPPTYIPSDYFEEH 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr17035g00001 333 Gene3D - 89 202 - -
Mupr17035g00001 333 SUPERFAMILY Cyclin-like 65 201 IPR036915 -
Mupr17035g00001 333 SMART cyclin_7 208 291 IPR013763 -
Mupr17035g00001 333 SMART cyclin_7 111 195 IPR013763 -
Mupr17035g00001 333 Pfam Cyclin, N-terminal domain 75 201 IPR006671 -
Mupr17035g00001 333 ProSitePatterns Cyclins signature. 106 137 IPR006671 -
Mupr17035g00001 333 PANTHER CYCLINS 61 310 IPR039361 -
Mupr17035g00001 333 Pfam Cyclin, C-terminal domain 204 321 IPR004367 -
Mupr17035g00001 333 FunFam Cyclin A1 190 318 - -
Mupr17035g00001 333 SUPERFAMILY Cyclin-like 204 324 IPR036915 -
Mupr17035g00001 333 Gene3D - 75 318 - -
Mupr17035g00001 333 SMART Cyclin_C_2 204 322 IPR004367 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr17035g00001 Mupr-Chr17035 3891 5578 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr17035g00001 19 332 Core Cell Cycle Gene Families AT5G43080 50.309 2.01e-111 326
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr17035g00001 K06627 - gmx:100787417 446.047