Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr17024g00002 ATGGCTGGAATGCTTCCGGGAGTTGAATGTGCTAGAAGGAGAAGGTTTCATCGACCCTTGGATTCAAATTCAACTTCTTTACCTTCACATGTATCCACACGGCGCTCTTCTTTCTGTTTGTATGCTAGTAACCATGAATCTCGTCTTTCCTCATCCTCTTCACTGCAAAGAAACATTTTATACCAGGCACACCCAGATGAGAATATGATAGGAGCAGCCAGAGAAGCCAAACAGAGATTGGATGACAAGTTCAGATCACAAAGGATGTCAGAAAATAAAAGGCAAAATAGCATAAAGGATGAGAGAAGAACAAGCATAGCAGAGTTGCAGACAGAGGTATATGGATCAAAGAAAAGTGGTTCAAGGAAGTTCAGTTGGAGCAAATGGAGCTGGAAGGCCTCGGAACAAGAGGATTGTGCCGTGTGCTTGGAATCATTCAGAGTTGGAGAGACACTGATCCATCTTCCTTGTGCTCATAGGTTCCATGACAGATGCTTGAAACCGTGGTTGGAAAACAATTCCCATTGTCCATGCTGCAGAACCACCGTTCCTTTTCTCTAG 561 0.4385 MAGMLPGVECARRRRFHRPLDSNSTSLPSHVSTRRSSFCLYASNHESRLSSSSSLQRNILYQAHPDENMIGAAREAKQRLDDKFRSQRMSENKRQNSIKDERRTSIAELQTEVYGSKKSGSRKFSWSKWSWKASEQEDCAVCLESFRVGETLIHLPCAHRFHDRCLKPWLENNSHCPCCRTTVPFL 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr17024g00002 186 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 103 184 IPR013083 -
Mupr17024g00002 186 FunFam Zinc finger family protein 113 185 - -
Mupr17024g00002 186 Pfam Ring finger domain 138 180 IPR001841 -
Mupr17024g00002 186 CDD RING-H2_PA-TM-RING 138 180 - -
Mupr17024g00002 186 SUPERFAMILY RING/U-box 126 185 - -
Mupr17024g00002 186 ProSiteProfiles Zinc finger RING-type profile. 139 180 IPR001841 -
Mupr17024g00002 186 SMART ring_2 139 179 IPR001841 -
Mupr17024g00002 186 PANTHER SI:CH211-59O9.10 20 183 - -
Mupr17024g00002 186 MobiDBLite consensus disorder prediction 82 102 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr17024g00002 Mupr-Chr17024 9851 11213 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr17024g00002 1 85 C3H Transcription Factor Family AT2G15580 52.632 7.45e-22 84.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr17024g00002 - - gmx:100527583 286.96