Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr17022g00002 GCATTCATATTCTGTGTTCCAATATTCTTCACTCTCATTCTCCTCTTTCTCTTTTACCTCTTCTACCTCAGACCGCGAAGAGGCCTCTATTGGATCGCACACTCTCGTGTTCCACACAATGCCATCTCCACGCCACATTTCGGCTTGAACAAAGACCTCAGAGAGATGTTGCCCGTTATTGTCTACAACCAAAGCTTTTCTGTCAATGATACTCAGTGCTCAGTGTGCCTTATGGACTACCAGCCAGAGGATAGGCTGCAACAGATACCTGCATGTGGCCATACATTTCATATGAGCTGCATTGATCTTTGGCTTGCCACCCATACCACCTGCCCCCTCTGCCGTTTCTCCCTACTAACCACTGCCAAATCTTCAACACAGACATCCAATATGCAGAACAATGAAGAAACACAAGCCATGGAATTCTCTGAGTCAAGATCTACTAGGCTTCTAGAAACCACTGTCCTCCAAAATGACTCCGGAGAAGTTGCAATCAGCGCTCACTGCATTGATGTTGAAGGGCAAAATGTACAAAACAATCAATAA 546 0.4542 AFIFCVPIFFTLILLFLFYLFYLRPRRGLYWIAHSRVPHNAISTPHFGLNKDLREMLPVIVYNQSFSVNDTQCSVCLMDYQPEDRLQQIPACGHTFHMSCIDLWLATHTTCPLCRFSLLTTAKSSTQTSNMQNNEETQAMEFSESRSTRLLETTVLQNDSGEVAISAHCIDVEGQNVQNNQ 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr17022g00002 181 CDD RING-H2_EL5-like 72 115 - -
Mupr17022g00002 181 ProSiteProfiles Zinc finger RING-type profile. 73 115 IPR001841 -
Mupr17022g00002 181 Pfam Ring finger domain 72 115 IPR001841 -
Mupr17022g00002 181 SMART ring_2 73 114 IPR001841 -
Mupr17022g00002 181 SUPERFAMILY RING/U-box 56 121 - -
Mupr17022g00002 181 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 38 121 IPR013083 -
Mupr17022g00002 181 PANTHER OS11G0150450 PROTEIN 36 159 - -
Mupr17022g00002 181 FunFam RING-H2 finger protein ATL7 39 120 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr17022g00002 Mupr-Chr17022 7238 9851 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr17022g00002 1 181 C3H Transcription Factor Family AT1G33480 48.404 1.96e-51 164
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr17022g00002 K19039 - gmx:100794211 290.041