Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr17011g00004 ATGGATGCGAAGGATATCCTTGGATTGCCCAAAAACTCATTCCCACCTCTCGAGAAGAAGTCTCGACCTCCCAAAGAGTCTCAAAGAAAACCAGATGGCATTTCGCGCGAGGTGTATGCGCTTACCGGTGGATTGGCGCCTCTTATGCCGGCTATTGAAGCTTCTCAATTGAAGAAAAAGTCTCCTCCTCTCGAAAAGATCACTTGGCAGTGGCTTCCTTTCACCAGTTCTGCTCGTAAAGACAATCTTCATCTTTACCATTGGGTAAGAGTCGTCAATGGTGTTCCTCCTACTGGGGACTATTCTTTTGCCAAGTATAATAAGTCTGTTGACGTGATCAAATACACAGATGAGGAGTATGACAAAAGACAAGGATATTTTGTTATTCCCGTGTGGTCTAATGACAAGTTACACCGATACATCCAAGAGAGGAATAGTTTTCTTGGTGGAGCACTTGCTCTGTTTGGGGAGATGTGGACCAAGGAGGAGACAGATCAATTATTTGACTTGTGTGAGAGATTTGATCTTCGATTTGTTGTAATAGCTGATAGGTTTCCATCATCTCGGACTGTAGAGGAATTAAAGGATAGATATTATAGTGTTTCCCGGGCCGTATTGGTAGCTAGGGCTCCATCTTCTGGGGATGTTGCAGCACATCCTCTTGTTAAGGAACCGTATAATGTTTCACAAGAAATGGAGCGAAAACGAGCACTGTCCATGGTCCTCTCTCAAACAAGGCAACAAGAACGAAGAGATGAAGAGGTTCTTGTTGAAGCAAAAAGAATAGCTGAATCACGCATTCCTCCCAAGGTTGCTGAAGAGTCTCAAGTAGTTGCTTCTAATGCTGGTGCAGAAGCTACAGAGAGGGCTGTCCCTGGTGAAACCATATCTCCACCAAATGCACAACTTCCATCAATGGTTGTGCCTTCCACATTATCAGATAACGCATCTACTCTAGCTTCTCTTCGCATGCTTCGTGTATATTTGAGAACATATGCACTTGAGCAAATGGTGCAAGCTGCGAACTCATCTGCTGGACTTCGGACTATCAAACGGGTTGAGCAAACTTTGCAAGATCTTGGGGTCAATTTGAAACCTAGGGTTCCAACAAAAGCTGTTTGTGCAGAGCATCTTGAATTAAGAAGAGAAATACTAACTTGGCTTAATCTTCAGAAGCAGGTGCAATATAAAGAGGCTGAAGGTTCCTCTTTTCGTGATGGGTCATATGGTGAAACACCTGGCACACCAAAGCATTTACATCGTGGTGGGGATCAGGATCGGACATTTGTTCCAGATTCAATGAATTTTGGAGTGGAAAGGGTTGGCAAAAAGGACCAAAAGCGCAAGGCTCCTGGAGCTCCATCGGCTCATAAAAGACCTAGAAAACTAAAGGCCTCAGATCTTTAG 1407 0.4414 MDAKDILGLPKNSFPPLEKKSRPPKESQRKPDGISREVYALTGGLAPLMPAIEASQLKKKSPPLEKITWQWLPFTSSARKDNLHLYHWVRVVNGVPPTGDYSFAKYNKSVDVIKYTDEEYDKRQGYFVIPVWSNDKLHRYIQERNSFLGGALALFGEMWTKEETDQLFDLCERFDLRFVVIADRFPSSRTVEELKDRYYSVSRAVLVARAPSSGDVAAHPLVKEPYNVSQEMERKRALSMVLSQTRQQERRDEEVLVEAKRIAESRIPPKVAEESQVVASNAGAEATERAVPGETISPPNAQLPSMVVPSTLSDNASTLASLRMLRVYLRTYALEQMVQAANSSAGLRTIKRVEQTLQDLGVNLKPRVPTKAVCAEHLELRREILTWLNLQKQVQYKEAEGSSFRDGSYGETPGTPKHLHRGGDQDRTFVPDSMNFGVERVGKKDQKRKAPGAPSAHKRPRKLKASDL 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr17011g00004 468 MobiDBLite consensus disorder prediction 399 468 - -
Mupr17011g00004 468 SMART sant 155 204 IPR001005 -
Mupr17011g00004 468 CDD SANT_DMAP1_like 159 201 - -
Mupr17011g00004 468 MobiDBLite consensus disorder prediction 1 34 - -
Mupr17011g00004 468 Gene3D - 98 214 - -
Mupr17011g00004 468 Pfam SANT/Myb-like domain of DAMP1 101 205 IPR032563 -
Mupr17011g00004 468 MobiDBLite consensus disorder prediction 283 303 - -
Mupr17011g00004 468 SUPERFAMILY Homeodomain-like 154 204 IPR009057 -
Mupr17011g00004 468 PANTHER DNA METHYLTRANSFERASE 1-ASSOCIATED PROTEIN 1 FAMILY MEMBER 1 459 IPR027109 GO:0006281|GO:0006338|GO:0035267|GO:0043967|GO:0043968
Mupr17011g00004 468 MobiDBLite consensus disorder prediction 438 452 - -
Mupr17011g00004 468 MobiDBLite consensus disorder prediction 18 33 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Mupr17011g00004 SANT_DAMP1_like 8.9e-24 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr17011g00004 K11324 - gmx:100818926 790.415