Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr17005g00001 ATGGGTCATGAGCTAACTACACAAATGAACTTAACACTACTTCCAACCCAAAACCTTAAAGCATCAGCCATGTCAAGTGGAATGTTTATGCCCTCCGGTGAAAATCTTGACATAGCATGGCAATGGAACAGTTTGAAAGATATCAAAGATAGAAAGTCTGTGACAATTTTCGATGATGACATTGGCAACAACTTGACTTGGGGAAATGTTGCCAACTTAGCTGGTGTGCGTGAGACTTGGGTTTACACTAGGGAACGAGCGAGACAAGGGATAGGTATTGTTGGTGCATTTGCTGCTGCTGTTGTTTTGGAAGCAAATCCTGCACATGTCAAGGGTCTTTATCGTCGTGGAATGGCCTACATGGCTGCCGGAGATTTTGAAGAAGCAAGGGCTGATTTCAAAATGATGATGAAAGTTGACAAGTCAACTGAATCAGATGCAACTGCAGCTCTTCAAAAACTGAAGAAGAAGGAGCAGGAAGTTGAGAAGAAAGATAGGAAACAATTTAAAGGGCTATTTGACAAGAAGCCTGGTGAAATTTCGGAAGCTAAAGCTGATAAAGATGGAGATCAGATAACAAGTGAAAGCCAGAAAGATGATGAAGTACATGAGGACTCAGATGGAACAAATTCAGAGGATTCACATGAAGCTCCACCTGAGCCACAACGAACGGGTTGGTTCTCTTTCTTTTGGCCTTCTGGCAGAAGATTTTTTGAATCTCTTGGGCTTAATAGATGTACCATACTTTAA 750 0.4173 MGHELTTQMNLTLLPTQNLKASAMSSGMFMPSGENLDIAWQWNSLKDIKDRKSVTIFDDDIGNNLTWGNVANLAGVRETWVYTRERARQGIGIVGAFAAAVVLEANPAHVKGLYRRGMAYMAAGDFEEARADFKMMMKVDKSTESDATAALQKLKKKEQEVEKKDRKQFKGLFDKKPGEISEAKADKDGDQITSESQKDDEVHEDSDGTNSEDSHEAPPEPQRTGWFSFFWPSGRRFFESLGLNRCTIL 249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr17005g00001 249 MobiDBLite consensus disorder prediction 175 219 - -
Mupr17005g00001 249 Coils Coil 144 167 - -
Mupr17005g00001 249 SUPERFAMILY TPR-like 102 165 IPR011990 GO:0005515
Mupr17005g00001 249 Gene3D Tetratricopeptide repeat domain 96 175 IPR011990 GO:0005515
Mupr17005g00001 249 MobiDBLite consensus disorder prediction 175 226 - -
Mupr17005g00001 249 ProSiteProfiles TPR repeat profile. 110 143 IPR019734 GO:0005515
Mupr17005g00001 249 PANTHER ARYL HYDROCARBON RECEPTOR INTERACTING PROTEIN RELATED 101 219 IPR039663 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr17005g00001 Mupr-Chr17005 3642 7110 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr17005g00001 102 175 Calmodulin-binding Proteins AT5G48570 33.784 8.62e-06 44.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr17005g00001 - - gmx:100818201 265.774