Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr16995g00002 ATGATCAGAACTAACACTATATCTGTTCTGCAGCCTTGTGCGAGAGCAAGTGGTTGCATCTTTGATCATCGTAAATTTCTGATAGCCTGCACGGATCATCGGCATCTCTTCCAACCTCGTGGTAATCAATATTTAGCACAGATAAAAAAGTTGAAGGCTAGGAAAATGATGTGGGAGATAAGGAAGCGATCAAATGAAGCTTGCAGAAAAGATATTGGAGATGAAGAGAGATGGTTGGAAAATTGTGGAGAGGATGAAGAATTTTTGAAACGTGAGAATAAGAGGCTTCATCGTGATTTATTGAGAATAGCCCCTGTGTACATTGGAGGTTCAGATTCTGCCAGTGAAAATTCATTTCAGGGATGGGAATCTGTTGCTGGGCTTAAAGATGTCATCCGTTGTATGAAAGAAGTTGTTATTTTACCTCTGCTATATCCTGAGCTCTTTGATAATTTAGGGCTTACACCTCCAAGAGGTGTTCTTTTGCATGGTCATCCTGGAACAGGGAAAACCTTAGTGGTCCGGGCATTGATAGGTGCATGTGCCCGTGGTGATAAGCGAATTGCATATTTTGCCCGTAAAGGTGCAGATTGCTTGGGGAAGTATGTTGGTGATGCTGAGCGTCAACTAAGACTATTATTTCAGGTTGCTGAGAAATGTCAACCTTCTATAATATTCTTTGATGAAATAGATGGGCTGGCACCTCGTCGCACTAGGCAGCAAGATCAGACACATAGTTCTGTTGTGTCAACATTGCTTGCTCTTATGGATGGTTTGAAATCTAGGGGTTCAGTTGTGGTCATAGGTGCAACAAACCGTCCTGATGCTGTTGACCCAGCACTTAGGCGCCCTGGTAGATTTGATCGGGAAATTTATTTTCCATTACCATCGATTGAGGACAGAGCTTCCATTCTCTCACTTCACACCCAGAAGTGGCCAAAACCAATTACTGGATACTTGCTTGAGTGGATTGCAAGAAAAACACCTGGCTTTGCTGGTGCTGATCTCCAGGCTCTTTGTACCCAAGCAGCGATCAATGCGTTGAAGAGGAATTTCCCTTTGCAAGAAGTCCTGTCTTTAGCTGCTGAAGAAAAACATTCTGGTTCTAAGCACATTCCTCCTCCATCCTTTGCAGTGGAGGAGAGGGATTGGTTAGAGGCAATTTTTTCTTCCCCACTACCTTGCTCCCGGAGAGATGCTGGAAATGCTGCTAATGATGTTGTATGCTCCCCTCTTCCCATCCAACTTATTCCTTGTTTATTGCGGCCATTATGCACTCTTCTTGTATCTCTTTATCTTGATGAACGTCTATGGTTACCACTTCCCATATCTAAAGCTGTAACAGTGATAAAGGATGTCATGATTTCTGCTCTACGCAAAAAGCAAAAGCCTTTTGATCACTGGTGGTTGCACATGGATGATTTTCTTCAAGAAACAAATATTGTTTACCAGTTAAAGAGAAGGCTTACTTGTTCTGGCATTTTATCTGTGGACAACGACAATGCTGGTTCTTATGATACTGTGGATGATGCCAATGATAACAACTTGAAGTTAGAATCCTCTGCAAGGAACCAGCTTGGCATGCATAGTAGTTTATTTGCATTGACCAACAAATCAGGATTTCGGATATTAATTTGTGGAAATCCACGATCTGGCCAGAGACATCTTGCTTCTTGCCTTCTTCACTGCTTTATTGGGAATGTTGAAATACACAAGATTGATATGGCAACTATTTTACAAGAAGGGCATGGAGAAGTGGTGCAAGGGATTGCTCAAATATTAAGTATGTCTATCTTTTCTAGTTTTTGGCTGGTAATGTTGATTTTTGTCCTTTTAGAATCACTGTTAACTAAGTATGCTAATTACCAAAAACTCTGGAGATTGAATAAGCTTCACCACTTTTTGCATGTGGCAGTGAAATGTGCTAGCAGGCAATCTTGCATAGTGTTCTTGCCAAGAATTGATCTATGGGCTGTGGATAAACATTTCCAAATTGCTGAAAGGACTGATTCGTGTTTAACGATGAGCAAGTCTTGTTTCACACCAAACCATGTTGCTGAGAAGGAAAATGAGATCAGTACTGGGAAAAACTCAACTGAGATGACCAAAGGCCAAGCCAACACAAAGGCTTCATATGCGTGGATGTCATTTATTGAGCAGGTGGAATCCATTGGTGTATCCACATCCTTGATGATTCTGGCTACTTCTGAAGTTCCCTATACAGAACTTCCTCACAAAGTAAGAGAATTCTTCAAGAATAATCAATCTAAAGACAGCCAGTCAACTCCTTTGGAGCAGACAGTTCCTCGATTCTCTGTGCAGATTGATGGGAATTTGGATAATGACTTGGTGATCAATCTATCTGCAGTAGAGCTATTGAGAAATGTAGTTGAGCAGCATGTTCAATTGATTCATCAGGGATCTCATGTTCATATGGGTGCCCAGAAGGGCAACAGAACCTATGGTTCAATTGAAGTTTGTAAAGATAAGGTATGTCAAAGAAAAGAAGATGGACCTGCCGACGATAAAAAGGGTGAAATCCAATGTGAATCTTTTACCAAAGTTCCACCAACACCGAATAGCAAGTCACTAAAGGGAAAGTCAACTGTGTTGTTGGCAATATCCACACTTGGCTATCAAATTCTCATGTACCCGCATTTTGCTGAGCTTTGTTGGGTCACTTCAAAACTCAAAGAAGGTCCTTGTGCTGATGTAAGTGGACCTTGGAGGGGCTGGCCTTTCAATTCCTGTATAACTCGTCCTAATAATTCACACGACAAGGTGGCAGTTTCTTGTAGTTCTGGTGGCATTAAAAGCAGAGAAGTAGTCAGAGGCTTGATTGCGGTTGGTTTATCAGCTTACAGAGGTGTTTATAAATCAGTTATGGAAGTTTCCCTTGATGTAAGGAAGGTTCTCGAGATCTTAATTGAGAAAATCAATACCAAAATTCAAGCTGGGAAAGATAGATATCAATATCTTCGTATTTTATCACAAGTGGCTTATTTAGAAGATATGGTCAACAACTGGGCTTACATATTGCTAAGTCTGGAACAGGATTCCCCTGAGCATAAAGCAAAGATTTTACCAGCAAGTGATGGGTCATTAAACAGTCATCTCACACGTGAAAATCACCAAACCGAAGGTGAGGACTGCCATTTGGTTGGTCCTGTAGATGGTCATGATTTGGAGACATTGGAGGGAAGTCACAAGGAAATTCCTGCCTCTAATGACAAAAATGATAATTTGGATGTTATTAATTGTGATGATGGAAATGCTAGTTCTGAAGAGTCTCTACAGAACCATTCTTTTTCAGATAAGCATATCAATAACTCTGGTGCTGCAAACCAACCACTTTATCCATCCACAAGTCAGGAGAATGGAACATTATTTGGACAATCTGAATCTGTACCTGCTGGAAATAATGTGGTGCTGGGTGAAGAACCAGGGATTTCAAAAGACTTGAACAAATCCATGTGCACTCACTCCGTGGTCCTTTCTGAAAATGGAGTTCACACTGCTTGTGAGCTGGACACACAAAATGTTGAGATTGGTAACACCGAGACACTGCTTGTGACAGACTCTGATCAGCCTCTTAGCTCTTCGTCAATAGAGACTGGTACTAAATCAAGTGATGTTAAATCTGATAAACATGAGAATGCTACAGATAACAATGTCTCTTCAAGTAATGGCAGTGGCCCTGCTCAATCTGGGGTTATTTGCTTGTATCAATGTTGCCCTGCATGTCTCAACAGTCTCCATCATTTAACAAAGAAAATACTTGTTGAAAAGTGGGGTTTGAACAGTGACCAGTGGACAGTAGAAGATGTCCATGATGCTGTTGCATCATTATCTGTGGATCTTATTTCAGCAGTCACAAAATGCTTTATGGCTGAAGACGAAAAGCATGGAACACCTCTTGATTATTTGAACTTGAGAACGTGTAATAAAGGCAAGGATATTGTGCCAGCTGAATGTGTTTCTCACTCTGCAAGCCAACATGCAACTGCAATGGAATCCCCCAAGCTTGATATTAAATTTGTTTTCAGAGATGGTGTACTAGTTCATATGGACCCAGAAAAGGATGTCACAGTTCACTGTAAATTTGAGAACTTGTGCCTTTGTTCTCTAAGAGAGTTGATACTAGTGACCAAGGCTATTGTTGCATAG 4167 0.4104 MIRTNTISVLQPCARASGCIFDHRKFLIACTDHRHLFQPRGNQYLAQIKKLKARKMMWEIRKRSNEACRKDIGDEERWLENCGEDEEFLKRENKRLHRDLLRIAPVYIGGSDSASENSFQGWESVAGLKDVIRCMKEVVILPLLYPELFDNLGLTPPRGVLLHGHPGTGKTLVVRALIGACARGDKRIAYFARKGADCLGKYVGDAERQLRLLFQVAEKCQPSIIFFDEIDGLAPRRTRQQDQTHSSVVSTLLALMDGLKSRGSVVVIGATNRPDAVDPALRRPGRFDREIYFPLPSIEDRASILSLHTQKWPKPITGYLLEWIARKTPGFAGADLQALCTQAAINALKRNFPLQEVLSLAAEEKHSGSKHIPPPSFAVEERDWLEAIFSSPLPCSRRDAGNAANDVVCSPLPIQLIPCLLRPLCTLLVSLYLDERLWLPLPISKAVTVIKDVMISALRKKQKPFDHWWLHMDDFLQETNIVYQLKRRLTCSGILSVDNDNAGSYDTVDDANDNNLKLESSARNQLGMHSSLFALTNKSGFRILICGNPRSGQRHLASCLLHCFIGNVEIHKIDMATILQEGHGEVVQGIAQILSMSIFSSFWLVMLIFVLLESLLTKYANYQKLWRLNKLHHFLHVAVKCASRQSCIVFLPRIDLWAVDKHFQIAERTDSCLTMSKSCFTPNHVAEKENEISTGKNSTEMTKGQANTKASYAWMSFIEQVESIGVSTSLMILATSEVPYTELPHKVREFFKNNQSKDSQSTPLEQTVPRFSVQIDGNLDNDLVINLSAVELLRNVVEQHVQLIHQGSHVHMGAQKGNRTYGSIEVCKDKVCQRKEDGPADDKKGEIQCESFTKVPPTPNSKSLKGKSTVLLAISTLGYQILMYPHFAELCWVTSKLKEGPCADVSGPWRGWPFNSCITRPNNSHDKVAVSCSSGGIKSREVVRGLIAVGLSAYRGVYKSVMEVSLDVRKVLEILIEKINTKIQAGKDRYQYLRILSQVAYLEDMVNNWAYILLSLEQDSPEHKAKILPASDGSLNSHLTRENHQTEGEDCHLVGPVDGHDLETLEGSHKEIPASNDKNDNLDVINCDDGNASSEESLQNHSFSDKHINNSGAANQPLYPSTSQENGTLFGQSESVPAGNNVVLGEEPGISKDLNKSMCTHSVVLSENGVHTACELDTQNVEIGNTETLLVTDSDQPLSSSSIETGTKSSDVKSDKHENATDNNVSSSNGSGPAQSGVICLYQCCPACLNSLHHLTKKILVEKWGLNSDQWTVEDVHDAVASLSVDLISAVTKCFMAEDEKHGTPLDYLNLRTCNKGKDIVPAECVSHSASQHATAMESPKLDIKFVFRDGVLVHMDPEKDVTVHCKFENLCLCSLRELILVTKAIVA 1388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr16995g00002 1388 MobiDBLite consensus disorder prediction 1189 1231 - -
Mupr16995g00002 1388 Gene3D - 296 361 - -
Mupr16995g00002 1388 PANTHER AAA DOMAIN-CONTAINING 14 1302 IPR045199 -
Mupr16995g00002 1388 ProSitePatterns AAA-protein family signature. 265 283 IPR003960 GO:0005524|GO:0016887
Mupr16995g00002 1388 MobiDBLite consensus disorder prediction 1042 1077 - -
Mupr16995g00002 1388 Pfam AAA+ lid domain 321 353 IPR041569 -
Mupr16995g00002 1388 MobiDBLite consensus disorder prediction 1189 1208 - -
Mupr16995g00002 1388 Gene3D - 121 295 IPR027417 -
Mupr16995g00002 1388 Pfam ATPase family associated with various cellular activities (AAA) 160 295 IPR003959 GO:0005524|GO:0016887
Mupr16995g00002 1388 FunFam ATPase family, AAA domain-containing 2 119 302 - -
Mupr16995g00002 1388 SMART AAA_5 156 297 IPR003593 GO:0016887
Mupr16995g00002 1388 MobiDBLite consensus disorder prediction 1040 1134 - -
Mupr16995g00002 1388 FunFam p-loop containing nucleoside triphosphate hydrolase superfamily protein 296 389 - -
Mupr16995g00002 1388 MobiDBLite consensus disorder prediction 1086 1134 - -
Mupr16995g00002 1388 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 122 352 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr16995g00002 Mupr-Chr16995 5250 10247 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr16995g00002 122 357 Calmodulin-binding Proteins AT3G56690 41.176 5.85e-46 179
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr16995g00002 - - gmx:100803849 2295.39