Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr16984g00003 ATGTTTCAGACAAACATGTTTGATTCTCACACTCACATGCTTGAGATGTCATCCCGCTCTGAGAGTGATTTGGGAAAGGCCAGAGATGATGAGTACGATAGCAAATTTGGCACCGACACCATCGACCCTCCTTCCGGCGACGACCAAGATCCCAACCCGCGACCCAAAAAGAAGGGTTACCGCCGCCACACACAGCGCCAAATAGAAGAAATGGAAGCCTTCTTCAAGCAGTGTCCTCACCCAGATGACAAACAAAGAAAAGAGCTCAGCCGTGAGCTGGGATTAGAGCCTTTGCAAGTCAAGTTTTGGTTCCAAAACAAGCGCACTCAGATGAAGACTCAACAGGAACGAAATGAGAATGCTATTTTGAAGGCAGAGAATGAAAAGCTTCGTGCTGAGAACAATAGGTACAAGGAGGCCCTAACCAATGCTACATGCCCCAACTGTGGGGGCCCAGCTGCTCTTGGGGAAATGTCCTTCGACGAGCAACACTTGAGGATTGAGAATGCTCGATTAAGAGAAGAGATTGATAGGATATCAGGAATTGCGGCCAAATATGTTGGAAAGCCCGTGACTTCTTCGTACTCGAACCTTTCATCTCTGAATAACAACCACATGCATGTTGGTAACTATGGAGCACATTCACAGTGTGGCGTGGTAGGAGAAATGTATGGCGGCAGTGACCTTTTTAGGTCACTCCCTGCTCCTGGTGATGCTGACAAACCCATGATTGTGGAGCTTGCTGTTGCAGCTATGGAGGAACTGACAAGGCTGGCTCAGGCTGGAGACTCTTTATGGGTCCCCGGCAGCCACCATTCTGAGATTCTAAATGAAGATGAATACTTGAGGACTTTCCCTGCTAGAGGTTTAGGTCCCAAACCCTTGGGCTTGAGATCTGAAGCTTCAAGGGAATCCGTCGTCGTTATCATGAATCACATTAACCTTATTGATATCCTTATGGATGTGGTGAGTGTTAATTAA 981 0.474 MFQTNMFDSHTHMLEMSSRSESDLGKARDDEYDSKFGTDTIDPPSGDDQDPNPRPKKKGYRRHTQRQIEEMEAFFKQCPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQQERNENAILKAENEKLRAENNRYKEALTNATCPNCGGPAALGEMSFDEQHLRIENARLREEIDRISGIAAKYVGKPVTSSYSNLSSLNNNHMHVGNYGAHSQCGVVGEMYGGSDLFRSLPAPGDADKPMIVELAVAAMEELTRLAQAGDSLWVPGSHHSEILNEDEYLRTFPARGLGPKPLGLRSEASRESVVVIMNHINLIDILMDVVSVN 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr16984g00003 326 Pfam START domain 247 322 IPR002913 GO:0008289
Mupr16984g00003 326 MobiDBLite consensus disorder prediction 1 64 - -
Mupr16984g00003 326 Pfam Homeodomain 57 112 IPR001356 GO:0003677
Mupr16984g00003 326 Coils Coil 108 143 - -
Mupr16984g00003 326 SUPERFAMILY Homeodomain-like 40 115 IPR009057 -
Mupr16984g00003 326 PRINTS Lambda-repressor HTH signature 94 110 IPR000047 GO:0003677
Mupr16984g00003 326 PRINTS Lambda-repressor HTH signature 85 94 IPR000047 GO:0003677
Mupr16984g00003 326 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 54 322 IPR042160 -
Mupr16984g00003 326 SMART HOX_1 56 118 IPR001356 GO:0003677
Mupr16984g00003 326 ProSitePatterns 'Homeobox' domain signature. 89 112 IPR017970 GO:0000981|GO:0006355
Mupr16984g00003 326 MobiDBLite consensus disorder prediction 14 37 - -
Mupr16984g00003 326 FunFam Homeobox-leucine zipper protein HDG1 45 130 - -
Mupr16984g00003 326 Gene3D - 45 131 - -
Mupr16984g00003 326 ProSiteProfiles START domain profile. 237 326 IPR002913 GO:0008289
Mupr16984g00003 326 CDD homeodomain 57 115 IPR001356 GO:0003677
Mupr16984g00003 326 ProSiteProfiles 'Homeobox' domain profile. 54 114 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr16984g00003 Mupr-Chr16984 7805 9134 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr16984g00003 1 322 Homeobox Transcription Factor Family AT4G04890 67.761 4.11e-156 453
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Mupr16984g00003 START 2.5e-05 CL0209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr16984g00003 K09338 - gmx:100815499 573.933