Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr16984g00001 ATGACATATATCGCTACCGATTTTCAGAACCAATGGTCAACTGTGTTTTGCGGTATTGTCTCCAGAGCTTTGACCCTTGAAGTCCTTTCAACTGGAGTAGCAGGAAACTACAACGGAGCCTTGCAAGTGATGTCAGCTGAGTTCCAAGTGCCTTCACCACTTGTCCCCACTCGAGAGAACTATTTCGTAAGGTACTGTAAGCAGCAACCAGATGGGATATGGGCGGTGGTGGATGTTTCCTTGGATAATCTGCGACCCAGTTCAATCTCAAGAAGCCGAAGAAGGCCCTCTGGTTGTTTAATTCAAGAATTGCCAAATGGTTACTCCAAGGTCACATGGATTGAACATGTAGAAGTGGATGATAGAGCCGTGCATAGCATATACAGACCTCTAGTTAATTCTGGCCTTGCCTTTGGAGCTAAACGCTGGGTGGTTACATTAGACAGACAATGCGAACGTCTTGCCAGTTCAATGGCCAACAACATACCAGCAGGGGACCTCTGTGTGATAACAAGTCCTGAGGGAAGGAAAAGTATGCTGAAGCTGGCGGAGAGAATGGTGATTAGCTATTGCGCTGGTGTTGGTGCTTCAACAGCACATGCTTGGACAACGCTATCTGCAACTGGATGTGATGATGTGAGGGTCATGACCAGAAAGAGCACGGACGACCCTGGTAGACCCCCCGGTATAGTGCTCAGTGCTGCCACTTCTTTCTGGCTCCCAGTTCCTCCAAAGAAGGTTTTTGATTTCCTACGTGATGAAAACTCAAGAAATGAGTGGGACATTCTCTCTAACGGGGGTCTAGTTCAAGAATTGGCACACATAGCAAACGGTCGTGATCCTGGCAACTGTGTCTCTTTACTTCGAGTCAATAGTGCAAATTCAAGCCAAAGTAATATGCTGATACTTCAAGAGAGTTGCACTGATTGTACCGGGTCATATGTAGTGTATGCTCCTGTGGATATTGTTGCTATGAATGTAGTCTTGAGTGGAGGAGATCCAGATTATGTTGCCCTGCTGCCCTCAGGCTTTGCTATTCTTCCTGATGGGCCTGGATTAAACGGGGGGCCCATACTTGATGTTGGATCTGGAGGTTCTCTGCTCACAGTAGCATTTCAGATCTTAGTTGATTCAGCCCCAACAGCAAAGCTATCTCTCGGTTCGGTGGCCACTGTTAACAGTTTAATTAAGTGCACAGTTGAAAAGATCAAAGTTGCAGTCATACTGAGAACAAAGGTAGAAAAAGTAACAGGCTCGGAGTGGTGCCTATTTCCTTTTCAAAACAAGGGGAATAAGTCAATGAACGCACCTCGGAGTATCACTTCAATGTTGGAACTTTGA 1341 0.4616 MTYIATDFQNQWSTVFCGIVSRALTLEVLSTGVAGNYNGALQVMSAEFQVPSPLVPTRENYFVRYCKQQPDGIWAVVDVSLDNLRPSSISRSRRRPSGCLIQELPNGYSKVTWIEHVEVDDRAVHSIYRPLVNSGLAFGAKRWVVTLDRQCERLASSMANNIPAGDLCVITSPEGRKSMLKLAERMVISYCAGVGASTAHAWTTLSATGCDDVRVMTRKSTDDPGRPPGIVLSAATSFWLPVPPKKVFDFLRDENSRNEWDILSNGGLVQELAHIANGRDPGNCVSLLRVNSANSSQSNMLILQESCTDCTGSYVVYAPVDIVAMNVVLSGGDPDYVALLPSGFAILPDGPGLNGGPILDVGSGGSLLTVAFQILVDSAPTAKLSLGSVATVNSLIKCTVEKIKVAVILRTKVEKVTGSEWCLFPFQNKGNKSMNAPRSITSMLEL 446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr16984g00001 446 SMART START_1 1 153 IPR002913 GO:0008289
Mupr16984g00001 446 ProSiteProfiles START domain profile. 1 156 IPR002913 GO:0008289
Mupr16984g00001 446 CDD START_ArGLABRA2_like 10 152 - -
Mupr16984g00001 446 Pfam START domain 9 153 IPR002913 GO:0008289
Mupr16984g00001 446 SUPERFAMILY Bet v1-like 20 155 - -
Mupr16984g00001 446 Gene3D - 23 154 IPR023393 -
Mupr16984g00001 446 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 9 407 IPR042160 -
Mupr16984g00001 446 SUPERFAMILY Bet v1-like 173 399 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr16984g00001 Mupr-Chr16984 5291 7762 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr16984g00001 10 407 Homeobox Transcription Factor Family AT4G21750 82.619 0.0 706
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr16984g00001 K09338 - gmx:100782240 764.607