Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr16978g00002 ATGTCAAAAGATTCTCACTCCGAGGAGATAAAAACGATTGAGCAGTGGAAATGGTCCGAAATGCAAGGCCTTGAGCTGGTTTCTGATGATGCTGCAGCAGCACCTTCACAGCAACAACAACAACAACACCAAGTTGCAAGGGAAATGGAAAGTTCTGAAGGCAACAAAGATGTTGCAGGAGCTAGTACTAGTAGCAGTGGGGAGAAAGCAGAGAGTGTTCCCTCTGTTGGATTCGGAGAGCTTTTCAGATTCGCTGATGGCTTGGATTATGTTCTAATGGGAATTGGAACGGTTGGAGCAATCGTTCACGGTTGTTCTCTGCCTCTCTTTCTTCGCTTCTTCGCGGATCTTGTCAATTCCTTTGGCTCCAATGCTAATGACGTAGAAAAGATGACTCAGGAAGTGGTCAAGTATGCATTTTACTTCCTGGTGGTGGGGGCTGCTATATGGGCATCTTCGTGGGCAGAGATTTCGTGTTGGATGTGGAGTGGGGAGCGTCAATCCACGAGGATGAGAATAAAGTATCTGGAAGCAGCGTTGAATCAGGACATTCAGTTCTTTGACACGGAGGTTCGGACGTCCGATGTTGTTTTCGCCATCAACACCGATGCTGTCATGGTCCAGGATGCCATTAGTGAGAAGGTGAGGTGCCAAATTGAACAAGTTTGTGTTGTTAGATTTGGACTACTGGGGAATTTCATTCACTACATGGCAACCTTTGTTTCTGGTTTTGTTGTGGGTTTCACTGCTGTGTGGCAATTAGCTCTGGTTACTCTTGCTGTTGTCCCAATGATAGCTGTGATTGGAGGCATTCACACCGCCACCTTGGCCAAGCTCTCCGGCAAGAGCCAGGAGGCTCTTTCTCAAGCTGGCAACATTGTAGAACAGACGGTTGCGCAAATCCGAGTGGTGATGGCCTTTGTTGGGGAGTCCAGGGCATTGCAGGACTATTCATCAGCCTTGAGGGTTGCACAGAAGATTGGCTACAAAACTGGGTTTGCAAAGGGAATGGGATTGGGTGCCACTTACTTTGTTGTTTTCTGCTGTTATGCTCTTCTGCTGTGGTATGGAGGCTATCTGGTTAGGCACCACGCCACCAATGGAGGACTTGCCATTGCAACCATGTTTGCTGTTATGATTGGAGGATTGGGATTGGGGCAATCTGCACCTAGTGTGGCTGCATTTACAAAGGCCAGAGTTGCTGCTGCGAAGATTTTCCGTATAATTGATCACAAGCCGAGTATAGATCGAAATAGTGAATCTGGGATGGAACTAGAGACAGTTACTGGACTTGTGGAGCTGAAAAATGTAGACTTTTCTTACCCATCTAGGCCAGAGGTTCGGATCCTCAATGATTTCTGCTTGAATGTGCCTGCTGGCAAGACTATAGCTTTGGTGGGTAGCAGTGGCTCTGGTAAGAGCACTGTTGTCTCCCTCATTGAGAGATTCTATGACCCAACTTCAGGACAAGTTCTGCTAGATGGGCACGACATTAAAAATTTGAAGCTTAGATGGCTGAGGCAGCAGATAGGACTAGTGAGTCAAGAGCCTGCTTTGTTTGCTACGACAATACGAGAAAATATACTGTTGGGTAGGCCTGATGCAGACCAGGTTGAGATTGAAGAAGCTGCCAGGGTTGCTAATGCCCATTCCTTCATCATTAAACTTCCTGAAGGCTATGAAACCCAGGTAGGAGAAAGAGGGCTGCAACTTTCTGGAGGGCAAAAACAGAGAATAGCAATAGCAAGAGCAATGCTGAAAAACCCTGCAATTCTTCTCCTAGATGAAGCAACAAGTGCATTGGACTCAGAGTCAGAAAAGCTGGTGCAAGAAGCCCTTGACCGGTTCATGATTGGCAGAACAACTCTTGTAATTGCGCATCGCCTCTCCACAATTCGCAAAGCTGACCTTGTAGCTGTGCTTCAGCAAGGAAGTGTTTCTGAAATTGGAACTCATGATGAGCTCTTCTCAAAAGGTGAAAATGGAGTCTATGCCAAGCTTATAAAGATGCAAGAGATGGCTCATGAAACTGCCATGAGTAATGCCAGAAAGAGTAGTGCAAGGCCTTCAAGTGCCAGAAACTCTGTAAGCTCACCAATAATTGCTAGGAATTCTTCTTATGGACGGTCGCCATACTCGCGCAGGCTATCTGATTTCTCTACATCTGATTTTAGTCTGTCCCTTGATGCATCACATCCAAGTTACCGGCTCGAAAAGCTTGCTTTCAAAGAGCAAGCCAGTTCCTTCTGGAGACTTGCAAAAATGAACTCTCCTGAATGGCTTTATGCTTTAATTGGCTCTATAGGGTCTGTTGTTTGTGGATCCCTTAGTGCCTTCTTTGCTTATGTTCTTAGTGCTGTCCTCAGTGTGTATTACAATCCAGACCACAGATACATGATCCGCGAAATAGAAAAGTACTGCTACTTGTTGATTGGCCTTTCATCAACTGCACTTCTCTTTAACACGTTGCAACACTCCTTTTGGGACATTGTTGGGGAAAATCTTACAAAACGTGTGAGGGAGAAAATGCTGACGGCGGTGCTCAAAAATGAAATGGCATGGTTTGATCAGGAGGAAAATGAGAGTGCCAGGATTGCTGCAAGGCTGGCTCTTGATGCCAACAATGTCAGATCAGCCATTGGAGATAGAATTTCAGTAATTGTGCAGAACACTGCACTTATGCTAGTTGCCTGTACTGCAGGGTTTGTGTTGCAGTGGCGTCTTGCCCTTGTCCTCATATCTGTCTTTCCTGTTGTTGTTGCAGCCACTGTTTTGCAGAAAATGTTCATGACCGGTTTCTCTGGTGACCTGGAAGGTGCTCATGCCAAGGCCACACAACTAGCAGGAGAAGCTATAGCCAATGTAAGGACTGTTGCAGCCTTCAATTCAGAAACAAAAATTGTTGGCCTTTTCACCTCCAATCTCCAAGGTCCACTACAGCGTTGTTTTTGGAAGGGACAAATTTCTGGAAGTGGATATGGTGTAGCTCAGTTTGCACTTTATGCTTCCTATGCACTTGGTCTTTGGTATGCTTCTTGGCTAGTGAAGCATGGCATCTCTGACTTCTCTAAAACAATCCGAGTTTTCATGGTCCTAATGGTTTCTGCAAATGGTGCTGCTGAAACTCTAACACTGGCTCCTGACTTCATCAAAGGAGGCCGAGCCATGAGGTCAGTCTTTGAACTCCTTGACCGCAGAACTGAAATTGAGCCTGATGATCAAGATGCTACTCCTGTTCCTGACCGCCTTCGTGGTGAAGTTGAACTCAAGCATGTGGACTTTTCTTATCCAAGTCGCTCGGATATGCCAGTTTTTCGTGACCTCAGTCTTCGCGCCAGGGCTGGTAAAACTCTTGCCCTTGTAGGACCTAGTGGCTGTGGCAAGAGCTCAGTTATTGCACTTATACAGAGATTCTATGATCCAACATCTGGCCGGGTCATGATTGATGGCAAGGATATCAGGAAATACAACCTCAAGTCCTTAAGAAGGCACATTTCTGTGGTTCCTCAGGAGCCATGCTTGTTTGCTACTACTATTTATGAAAACATTGCTTATGGGCATGACTCAGCCACTGAAGCTGAGATAATTGAAGCTGCAACTCTTGCCAATGCACACAAGTTCATATCTGGGTTGCCAGAAGGATACAAAACATTTGTTGGGGAGAGAGGTGTTCAATTGTCTGGGGGACAAAAGCAAAGAATAGCAGTTGCTCGCGCTTTTGTGAGGAAGGCAGAGCTCATGCTTCTTGATGAGGCCACAAGTGCACTTGATGCTGAATCTGAGAGGTCTGTTCAGGAGGCTCTAGACCGTGCTTCCTCAGGAAAAACAACGATTATTGTTGCACACAGGCTATCAACTATCAGGAATGCCAATCTGATTGCTGTGATTGATGATGGGAAAGTAGCTGAGCAAGGCTCACACTCACAGTTGTTGAAAAATCACTCGGATGGGATTTATGCACGCATGATTCAGTTACAAAGGTTCTCACACAGCCAAGTCATTGGAATGGCCTCAGGTTCAAGCTCTTCAACAAGACCAAAAGATGATGAAAGAGAAGGCTAG 4062 0.4596 MSKDSHSEEIKTIEQWKWSEMQGLELVSDDAAAAPSQQQQQQHQVAREMESSEGNKDVAGASTSSSGEKAESVPSVGFGELFRFADGLDYVLMGIGTVGAIVHGCSLPLFLRFFADLVNSFGSNANDVEKMTQEVVKYAFYFLVVGAAIWASSWAEISCWMWSGERQSTRMRIKYLEAALNQDIQFFDTEVRTSDVVFAINTDAVMVQDAISEKVRCQIEQVCVVRFGLLGNFIHYMATFVSGFVVGFTAVWQLALVTLAVVPMIAVIGGIHTATLAKLSGKSQEALSQAGNIVEQTVAQIRVVMAFVGESRALQDYSSALRVAQKIGYKTGFAKGMGLGATYFVVFCCYALLLWYGGYLVRHHATNGGLAIATMFAVMIGGLGLGQSAPSVAAFTKARVAAAKIFRIIDHKPSIDRNSESGMELETVTGLVELKNVDFSYPSRPEVRILNDFCLNVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVLLDGHDIKNLKLRWLRQQIGLVSQEPALFATTIRENILLGRPDADQVEIEEAARVANAHSFIIKLPEGYETQVGERGLQLSGGQKQRIAIARAMLKNPAILLLDEATSALDSESEKLVQEALDRFMIGRTTLVIAHRLSTIRKADLVAVLQQGSVSEIGTHDELFSKGENGVYAKLIKMQEMAHETAMSNARKSSARPSSARNSVSSPIIARNSSYGRSPYSRRLSDFSTSDFSLSLDASHPSYRLEKLAFKEQASSFWRLAKMNSPEWLYALIGSIGSVVCGSLSAFFAYVLSAVLSVYYNPDHRYMIREIEKYCYLLIGLSSTALLFNTLQHSFWDIVGENLTKRVREKMLTAVLKNEMAWFDQEENESARIAARLALDANNVRSAIGDRISVIVQNTALMLVACTAGFVLQWRLALVLISVFPVVVAATVLQKMFMTGFSGDLEGAHAKATQLAGEAIANVRTVAAFNSETKIVGLFTSNLQGPLQRCFWKGQISGSGYGVAQFALYASYALGLWYASWLVKHGISDFSKTIRVFMVLMVSANGAAETLTLAPDFIKGGRAMRSVFELLDRRTEIEPDDQDATPVPDRLRGEVELKHVDFSYPSRSDMPVFRDLSLRARAGKTLALVGPSGCGKSSVIALIQRFYDPTSGRVMIDGKDIRKYNLKSLRRHISVVPQEPCLFATTIYENIAYGHDSATEAEIIEAATLANAHKFISGLPEGYKTFVGERGVQLSGGQKQRIAVARAFVRKAELMLLDEATSALDAESERSVQEALDRASSGKTTIIVAHRLSTIRNANLIAVIDDGKVAEQGSHSQLLKNHSDGIYARMIQLQRFSHSQVIGMASGSSSSTRPKDDEREG 1353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr16978g00002 1353 Pfam ABC transporter transmembrane region 94 382 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mupr16978g00002 1353 Pfam ABC transporter transmembrane region 765 1034 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mupr16978g00002 1353 CDD ABC_MTABC3_MDL1_MDL2 1087 1326 - -
Mupr16978g00002 1353 ProSitePatterns ABC transporters family signature. 571 585 IPR017871 GO:0005524|GO:0016887
Mupr16978g00002 1353 ProSitePatterns ABC transporters family signature. 1226 1240 IPR017871 GO:0005524|GO:0016887
Mupr16978g00002 1353 MobiDBLite consensus disorder prediction 56 71 - -
Mupr16978g00002 1353 CDD ABC_MTABC3_MDL1_MDL2 432 671 - -
Mupr16978g00002 1353 Gene3D - 430 695 IPR027417 -
Mupr16978g00002 1353 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 95 397 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mupr16978g00002 1353 FunFam ABC transporter B family member 1 422 672 - -
Mupr16978g00002 1353 Gene3D ABC transporter type 1, transmembrane domain 140 1060 IPR036640 GO:0005524|GO:0016020
Mupr16978g00002 1353 SUPERFAMILY ABC transporter transmembrane region 81 416 IPR036640 GO:0005524|GO:0016020
Mupr16978g00002 1353 SUPERFAMILY ABC transporter transmembrane region 751 1071 IPR036640 GO:0005524|GO:0016020
Mupr16978g00002 1353 Pfam ABC transporter 450 599 IPR003439 GO:0005524
Mupr16978g00002 1353 Pfam ABC transporter 1106 1254 IPR003439 GO:0005524
Mupr16978g00002 1353 Gene3D - 1078 1333 IPR027417 -
Mupr16978g00002 1353 FunFam ABC transporter B family member 1 80 430 - -
Mupr16978g00002 1353 CDD ABC_6TM_Pgp_ABCB1_D2_like 753 1069 - -
Mupr16978g00002 1353 PANTHER ABC TRANSPORTER B FAMILY 57 815 IPR039421 -
Mupr16978g00002 1353 FunFam ABC transporter B family member 1 743 1052 - -
Mupr16978g00002 1353 CDD ABC_6TM_Pgp_ABCB1_D1_like 93 405 - -
Mupr16978g00002 1353 MobiDBLite consensus disorder prediction 1334 1353 - -
Mupr16978g00002 1353 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 422 671 IPR027417 -
Mupr16978g00002 1353 MobiDBLite consensus disorder prediction 28 72 - -
Mupr16978g00002 1353 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1087 1323 IPR003439 GO:0005524
Mupr16978g00002 1353 SMART AAA_5 1114 1306 IPR003593 GO:0016887
Mupr16978g00002 1353 SMART AAA_5 459 645 IPR003593 GO:0016887
Mupr16978g00002 1353 MobiDBLite consensus disorder prediction 32 48 - -
Mupr16978g00002 1353 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 432 668 IPR003439 GO:0005524
Mupr16978g00002 1353 FunFam ABC transporter B family member 19 1053 1075 - -
Mupr16978g00002 1353 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1078 1326 IPR027417 -
Mupr16978g00002 1353 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 764 1051 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mupr16978g00002 1353 FunFam ABC transporter B family member 1 1077 1327 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr16978g00002 Mupr-Chr16978 26222 32196 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr16978g00002 68 1348 Calmodulin-binding Proteins AT2G36910 88.534 0.0 2313
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr16978g00002 K05658 - gmx:100814667 2396.7