Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr16978g00001 ATGGGCAATAGATTGGTGCATACTAGTGGCGGACTCAGAATGGAACGTGGGGTTCTTGATGATATCATCAATAGGCTGCTCGAAGTTAGAGGCAGACCTGGGAAGGCGGTGCATCTTTCTGAGACAGAGATCAAGCAGCTTTGTCTTGTCTCCAAGGATATCTTCTCCAACCAGCCCAACCTCTTGGAACTCGAGGCACCAATTAAGATCTGTGGAGATGTCCATGGTCAATATTCCGACCTTCTGCGACTCTTCGAGTATGGTGGATTTCCTCCTCGCTCTAATTACTTATTTTTGGGGGACTATGTTGATCGTGGGAAGCAAAGTTTGGAGACTATATGTCTTCTTCTAGCTTATAAAATAAAATATCCTAACAACTTTTTCCTTCTGAGGGGCAACCATGAATGTGCTTCTATAAACCGCATTTATGGATTTTATGATGAGTGTAAACGAAGATTCAGTGTGAGGCTTTGGAAAGTGTTCATAGATTGTTTCAACTGTTTGCCAGTGGCAGCTCTAATTGATGAGAAGATATTTTGCATGCATGGTGGACTCTCTCCTGAGTTACGCAATTTAAATCAGATAAAGAGTTTGCCACGTCCTACTGAAGTGCCTGAAACTGGTTTACTATGTGACCTCCTTTGGTCTGATCCTAGTCCTGACATTCGGGGTTGGGGAGAGAACGAACGTGGAGTTTCCTATACTTTTGGTGCTGACAGGGTGACTGAATTCGTTCAGAAGCATGATCTTGATTTGATTTGCAGGGCCCACCAGGTTGTGGAAGACGGATATGAATTCTTTGCTAACAGACAACTTGTGACCATCTTTTCGGCACCTAATTACTGTGGCGAGTTTGACAATGCTGGTGGTATGATGACTGTGGATGAGACACTGGTGTGCTCTTTTCAGATATTGAAGCCTCTAGATAAAAAGCCTAATAAGTTTAACTTTGGGAGCACAAGTACAGTTAAGCATGGTTCTCCAACAAAAGCCAAGCTGAATCCCACTATCCTAGAGCATCCCAAAGTACTATATGCGATGAAAATAATCAAAGATGAAGGGGTAAGATTGGCTAAATGA 1080 0.4296 MGNRLVHTSGGLRMERGVLDDIINRLLEVRGRPGKAVHLSETEIKQLCLVSKDIFSNQPNLLELEAPIKICGDVHGQYSDLLRLFEYGGFPPRSNYLFLGDYVDRGKQSLETICLLLAYKIKYPNNFFLLRGNHECASINRIYGFYDECKRRFSVRLWKVFIDCFNCLPVAALIDEKIFCMHGGLSPELRNLNQIKSLPRPTEVPETGLLCDLLWSDPSPDIRGWGENERGVSYTFGADRVTEFVQKHDLDLICRAHQVVEDGYEFFANRQLVTIFSAPNYCGEFDNAGGMMTVDETLVCSFQILKPLDKKPNKFNFGSTSTVKHGSPTKAKLNPTILEHPKVLYAMKIIKDEGVRLAK 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr16978g00001 359 Pfam Calcineurin-like phosphoesterase 67 259 IPR004843 GO:0016787
Mupr16978g00001 359 ProSitePatterns Serine/threonine specific protein phosphatases signature. 130 135 IPR006186 GO:0016787
Mupr16978g00001 359 PRINTS Serine/threonine phosphatase family signature 163 189 IPR006186 GO:0016787
Mupr16978g00001 359 PRINTS Serine/threonine phosphatase family signature 96 123 IPR006186 GO:0016787
Mupr16978g00001 359 PRINTS Serine/threonine phosphatase family signature 271 287 IPR006186 GO:0016787
Mupr16978g00001 359 PRINTS Serine/threonine phosphatase family signature 67 94 IPR006186 GO:0016787
Mupr16978g00001 359 PRINTS Serine/threonine phosphatase family signature 129 153 IPR006186 GO:0016787
Mupr16978g00001 359 PRINTS Serine/threonine phosphatase family signature 192 219 IPR006186 GO:0016787
Mupr16978g00001 359 PRINTS Serine/threonine phosphatase family signature 249 269 IPR006186 GO:0016787
Mupr16978g00001 359 SUPERFAMILY Metallo-dependent phosphatases 32 318 IPR029052 -
Mupr16978g00001 359 CDD MPP_PP1_PPKL 18 307 - -
Mupr16978g00001 359 FunFam Serine/threonine-protein phosphatase 12 316 - -
Mupr16978g00001 359 Pfam Serine-threonine protein phosphatase N-terminal domain 19 65 IPR031675 -
Mupr16978g00001 359 PANTHER SERINE/THREONINE PROTEIN PHOSPHATASE 22 312 - -
Mupr16978g00001 359 Gene3D - 12 318 IPR029052 -
Mupr16978g00001 359 SMART pp2a_7 39 309 IPR006186 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr16978g00001 Mupr-Chr16978 819 4906 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr16978g00001 46 252 Calmodulin-binding Proteins AT5G63870 31.855 1.68e-28 110
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr16978g00001 K06269 - gmx:100791655 610.142