Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr16962g00001 ATGGGAGAAAGAGATGGCTCCCAATGTTCAAAGACAAGCCCTTCTAACATTGATGAAGATGAGTGTGAAAGCAAGGCCAATGGAGATCAAAGCAAGCAAAACAACAATGGAGGAAGCTCAAGCAACAGCACAGTGGAAGAGAGTGAGAAACAGGTAAGGCCTTATGTTAGATCCAAGTTGCCAAGGCTTCGATGGACACCTGATCTTCATTTTCGCTTTATTCATGCGGTTCAACGACTTGGAGGACAAGAGAGAGCAACACCAAAATTGGTTCTTCAATTGATGAATATCAAAGGTTTAAGTATTGCCCATGTCAAGAGTCATTTGCAGATGTTTAGGAGCAAAAAGGTCGATAACCGAAATCAAGTATTCGCCGATCATAGTAATCTTGTTGAAATTGGAGACAAAAATATCTATAATCTTAGCCAGCTTTCCATGCTTCAAGGATATAATCCTGGTCAAAGTTCATCCTACTTCAGCTACACAAATAATTATCCAAGTTACGGATTCGGGGATGCTTCTTTTGGTGTCTACGAAAAACTGGCACATAGACCTATCGATTGGTCTAAGGGAAATTCTCGAGAAGGTTCTTCCATTTGTGGTGAACAATCACCAAGTAAAACCCGTGAACCAAAATACGAGTTTCTCTCGTTCGGTGCTTATGAATCTCAATGCACACGCACGAGATTTAGCCACGTTGATCACACGCCATCAATCAATATTCACCTAACAGCACAAAATCTCATGCCTATAACCCCAACAATTACAAATCCACCAGAATTGAAGACACTGAAAAGAAAGGCTTCAGATGCTACACTTGATTTGGATCTGTCACTAAAACTAAACTCAAAGATGGACCATGAATTTGATAGCAATCTTTCACTCTCATTGTGTTCTCAATCCTCATCTTCCAATCTTAGCAGCAGGTTGAATAAAGAAGCACAAGATCGATGTGAGGAACGAGGGATCAAAAGGACCAGTGCTCTAGATCTGACTATATGA 1002 0.4062 MGERDGSQCSKTSPSNIDEDECESKANGDQSKQNNNGGSSSNSTVEESEKQVRPYVRSKLPRLRWTPDLHFRFIHAVQRLGGQERATPKLVLQLMNIKGLSIAHVKSHLQMFRSKKVDNRNQVFADHSNLVEIGDKNIYNLSQLSMLQGYNPGQSSSYFSYTNNYPSYGFGDASFGVYEKLAHRPIDWSKGNSREGSSICGEQSPSKTREPKYEFLSFGAYESQCTRTRFSHVDHTPSINIHLTAQNLMPITPTITNPPELKTLKRKASDATLDLDLSLKLNSKMDHEFDSNLSLSLCSQSSSSNLSSRLNKEAQDRCEERGIKRTSALDLTI 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr16962g00001 333 MobiDBLite consensus disorder prediction 1 53 - -
Mupr16962g00001 333 MobiDBLite consensus disorder prediction 1 15 - -
Mupr16962g00001 333 SUPERFAMILY Homeodomain-like 60 115 IPR009057 -
Mupr16962g00001 333 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 57 117 IPR017930 -
Mupr16962g00001 333 PANTHER TRANSCRIPTION FACTOR KAN2-RELATED 29 238 IPR044847 GO:0000976|GO:0006355|GO:0010158
Mupr16962g00001 333 NCBIfam myb-like DNA-binding domain, SHAQKYF class 61 116 IPR006447 GO:0003677
Mupr16962g00001 333 MobiDBLite consensus disorder prediction 28 49 - -
Mupr16962g00001 333 Pfam Myb-like DNA-binding domain 63 111 IPR001005 -
Mupr16962g00001 333 FunFam Myb family transcription factor 59 117 - -
Mupr16962g00001 333 Gene3D - 60 117 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr16962g00001 Mupr-Chr16962 3639 5480 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr16962g00001 27 118 G2-like Transcription Factor Family AT2G42660 60.870 8.62e-33 120
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Mupr16962g00001 Myb_DNA-binding 2.4e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr16962g00001 - - gmx:102660246 435.261