Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr16953g00001 ATGGCCACCGCCACCGCAGCCGCCACCTCCTCCTTCATCGGGACGCGCCTCCGCGAGGCGCATTCCGGGTCGGGGCGGGTCCAGGCGAGGTTCGGGTTCGGATCGAAGAAGAAGGCCGCGCCGAAGAAGGTGTCGAAGGGTTCGGGATCGGGCTCGGACAGGCCGCTGTGGTACCCGGGAGCGAAGGCGCCGGAATGGCTCGACGGGAGCCTGGTCGGAGACTACGGGTTCGACCCGTTCGGGCTCGGGAAGCCCGCGGAGTACCTGCAGTTCGAGCTGGACTCGCTGGACCAGAACCTGGCGAAGAACGAGGCCGGGATTATCATCGGGACCAGGACGGAGCTGGCAGACGTCAAGTCCACGCCGTTTCAGCCCTACAGTGAGGTCTTTGGCCTCCAGAGATTCCGCGAGTGCGAGCTCATTCACGGAAGGTGGGCCATGCTCGCCACTCTCGGGGCCATCACCGTTGAGTGGCTCACTGGTGTCACCTGGCAAGACGCCGGCAAGGTGGAGCTAGTGGAAGGGTCATCATACCTTGGGCAGCCACTACCATTCTCAATCACGACACTGATTTGGATCGAGGTTCTGGTCATCGGCTACATCGAGTTCCAGAGGAACGCAGAGCTTGACCCAGAAAAGAGGCTGTACCCAGGTGGCAGCTACTTCGACCCTTTGGGCTTGGCCGCAGACCCAGAGAAGAAAGCCACCCTTCAATTGGCGGAGATCAAGCACGCACGTCTTGCCATGGTGGGCTTCTTGGGCTTCGCAGTTCAGGCTGCTGCCACCGGGAAGGGCCCACTCAACAACTGGGCCACCCATTTGAGCGACCCACTCCACACAACCATCATTGACACCTTCTCATCCTCCTCTTAA 873 0.6163 MATATAAATSSFIGTRLREAHSGSGRVQARFGFGSKKKAAPKKVSKGSGSGSDRPLWYPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQFELDSLDQNLAKNEAGIIIGTRTELADVKSTPFQPYSEVFGLQRFRECELIHGRWAMLATLGAITVEWLTGVTWQDAGKVELVEGSSYLGQPLPFSITTLIWIEVLVIGYIEFQRNAELDPEKRLYPGGSYFDPLGLAADPEKKATLQLAEIKHARLAMVGFLGFAVQAAATGKGPLNNWATHLSDPLHTTIIDTFSSSS 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr16953g00001 290 Pfam Chlorophyll A-B binding protein 63 259 IPR022796 -
Mupr16953g00001 290 SUPERFAMILY Chlorophyll a-b binding protein 49 287 - -
Mupr16953g00001 290 Gene3D Chlorophyll a/b binding protein domain 57 290 - -
Mupr16953g00001 290 MobiDBLite consensus disorder prediction 19 56 - -
Mupr16953g00001 290 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 5 285 IPR001344 GO:0009765|GO:0016020
Mupr16953g00001 290 FunFam Chlorophyll a-b binding protein, chloroplastic 111 288 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr16953g00001 Mupr-Chr16953 8703 10603 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr16953g00001 13 289 Chloroplast and Mitochondria Gene Families AT3G08940 85.252 1.05e-172 477
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr16953g00001 K08915 - gmx:100785180 543.502