Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr16945g00001 ATGGTGTCTGAATCGGAGACTCTTGCCCCTGTGGTTCAGAAGGTCAACACGTTAGAAGAGACATCAAGAAAGAGGTCTTGTCCAGGTAAAAAGAAGCAAGGGAAAGTCCCCAAGAGAGTTCACAAGGCTGAAAGAGAGAAAATGAAGCGCGAACACTTTAATGATCTCTTTCTTGCTCTTGCCAATGCACTTGGGGTAATAGACCTCAATGAACAGAGCAATGGAAAAGCTTCTATATTGAAGGAAGCCACCAGATTGCTGAATGACTTGCTCAGTCAGATCGAGACCCTGAAAAAGGATAGTGCATCTTTGCTGTCTGAAACTCATTATGTGACTATGGAGAAGAATGAGGTGGTGGAGGAGAATTCTGCTCTAAAATCTCAAATTGAGAAGCTTAAAGGTGAGATAAAAGCAAGAGTAGCCCAATTTAGACCTGACATGAATGTGCCTCATCCTTTGGAACTTCAGCAACCAGAAAAGGCAACAAAGTTTCCAGGAGAGAGTCTCCAATTGTATACCATAGAACCTACATTGCAGCAAGGACATGCAGTTTTGGTTGTCCCCTTAAGTCATCATCACCAAGAAGATGCTTTATCAGCTCATAATGTTGCTGAGTTGACCCCAAAACCCACCTCCACTATCAGTAAACCACATGCCAGGTATCCCACCCCAATGGATTCATGGTCATTACAGCTGCTTGCAGAGCAGCAAACTTCAAGTGTGAATAAATTGGCTACTTCGCTTTTGAAGGGACCAAGTGACACTATAGGTGACGCTGCCGCCGCCACAGCGCGCGGCGACAGTGGTGGCCCTGCTTGTGCTTGGTCGTTTTCTTTCTATGAGGTGGGTTGA 852 0.4531 MVSESETLAPVVQKVNTLEETSRKRSCPGKKKQGKVPKRVHKAEREKMKREHFNDLFLALANALGVIDLNEQSNGKASILKEATRLLNDLLSQIETLKKDSASLLSETHYVTMEKNEVVEENSALKSQIEKLKGEIKARVAQFRPDMNVPHPLELQQPEKATKFPGESLQLYTIEPTLQQGHAVLVVPLSHHHQEDALSAHNVAELTPKPTSTISKPHARYPTPMDSWSLQLLAEQQTSSVNKLATSLLKGPSDTIGDAAAATARGDSGGPACAWSFSFYEVG 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr16945g00001 283 Gene3D - 30 107 IPR036638 GO:0046983
Mupr16945g00001 283 Coils Coil 115 135 - -
Mupr16945g00001 283 Coils Coil 80 107 - -
Mupr16945g00001 283 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 38 114 IPR036638 GO:0046983
Mupr16945g00001 283 MobiDBLite consensus disorder prediction 15 41 - -
Mupr16945g00001 283 PANTHER TRANSCRIPTION FACTOR BHLH47 6 243 - -
Mupr16945g00001 283 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 37 90 IPR011598 GO:0046983
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr16945g00001 32 236 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G47640 45.291 9.31e-51 165
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr16945g00001 - - mtr:11438092 264.618