Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr1691g00002 ATGCAGCACCAGCATGTCTCCGCCGTGTTTTTTCTAAGCTTATGCTTTAGAATTGCGCTAGTATACACGCAAGGACAGCCTCATCACAGTGTTCTGGACCAACATTGGTACCCGGGCACCGCCACCTGGTACGGCAACCCCGAAGGAGACGGTAGCACCGGAGGGGCATGTGGGTATGGTACGTTGGTGGACGTGAAGCCGTTGAAGGCAAGGGTGGGTGCAGTGGGGTCGGTGCTGTTTAAGAAGGGAGAAGGGTGCGGAGCTTGCTATAAGGTCAAGTGTTTGGACCATAGCATATGTTCGAAGCGAGCGGTGACGGTTATAATAACGGATGAGTGCCCGGGCTGCCCGTCTGACCGAACGCACTTCGACCTTAGTGGCTCTGCCTTTGGGCGCATGGCTGTTGCGGGTGAAAACGGTCAGCTCAGGAACCGAGGTGAAATCCCAGTCATTTACCGAAGAACACCATGCTTGTATGCTGGCAAAAATATTGCCTTCCATGTCAATGAAGGTTCCACACCTTTTTGGCTATCACTTCTGGTGGAGTTTGAAGATGGAGATGGGGACATCGGCTCCATGCATATACAAGAAGCTGGGTCGAGTGAGTGGCTGCAGATGAATCATGTATGGGGTGCAAATTGGTGCATTGTTGGGGGGCTAAGAGGACCTTTCTCTGTTAAAGTAAGCACATCGACGGGGAAAAGCCTCACTGCCAAAGACGTTATTCCAAGCAAATGGTCTCCAAAAGCCACTTACACCTCTCGCTTAAATTTCCTTTCTTAA 783 0.5134 MQHQHVSAVFFLSLCFRIALVYTQGQPHHSVLDQHWYPGTATWYGNPEGDGSTGGACGYGTLVDVKPLKARVGAVGSVLFKKGEGCGACYKVKCLDHSICSKRAVTVIITDECPGCPSDRTHFDLSGSAFGRMAVAGENGQLRNRGEIPVIYRRTPCLYAGKNIAFHVNEGSTPFWLSLLVEFEDGDGDIGSMHIQEAGSSEWLQMNHVWGANWCIVGGLRGPFSVKVSTSTGKSLTAKDVIPSKWSPKATYTSRLNFLS 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr1691g00002 260 FunFam Expansin B3 22 158 - -
Mupr1691g00002 260 FunFam Beta-expansin 3 159 259 - -
Mupr1691g00002 260 PRINTS Major pollen allergen Lol pI signature 134 149 IPR005795 GO:0005576|GO:0019953
Mupr1691g00002 260 PRINTS Major pollen allergen Lol pI signature 112 127 IPR005795 GO:0005576|GO:0019953
Mupr1691g00002 260 PRINTS Major pollen allergen Lol pI signature 74 85 IPR005795 GO:0005576|GO:0019953
Mupr1691g00002 260 PRINTS Major pollen allergen Lol pI signature 230 247 IPR005795 GO:0005576|GO:0019953
Mupr1691g00002 260 PRINTS Major pollen allergen Lol pI signature 182 197 IPR005795 GO:0005576|GO:0019953
Mupr1691g00002 260 PRINTS Major pollen allergen Lol pI signature 166 181 IPR005795 GO:0005576|GO:0019953
Mupr1691g00002 260 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 175 254 IPR007117 -
Mupr1691g00002 260 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 54 162 IPR007112 -
Mupr1691g00002 260 CDD DPBB_EXPB_N 36 157 - -
Mupr1691g00002 260 SUPERFAMILY Barwin-like endoglucanases 30 161 IPR036908 -
Mupr1691g00002 260 Pfam Lytic transglycolase 77 151 IPR009009 -
Mupr1691g00002 260 SUPERFAMILY PHL pollen allergen 162 254 IPR036749 -
Mupr1691g00002 260 Gene3D - 22 157 IPR036908 -
Mupr1691g00002 260 Pfam Expansin C-terminal domain 164 243 IPR007117 -
Mupr1691g00002 260 PRINTS Expansin/Lol pI family signature 76 94 IPR007118 GO:0005576
Mupr1691g00002 260 PRINTS Expansin/Lol pI family signature 240 254 IPR007118 GO:0005576
Mupr1691g00002 260 PRINTS Expansin/Lol pI family signature 203 217 IPR007118 GO:0005576
Mupr1691g00002 260 PRINTS Expansin/Lol pI family signature 53 71 IPR007118 GO:0005576
Mupr1691g00002 260 PRINTS Expansin/Lol pI family signature 35 50 IPR007118 GO:0005576
Mupr1691g00002 260 PRINTS Expansin/Lol pI family signature 145 161 IPR007118 GO:0005576
Mupr1691g00002 260 Gene3D - 159 259 IPR036749 -
Mupr1691g00002 260 SMART dpbb_1 72 152 IPR007112 -
Mupr1691g00002 260 PANTHER EXPANSIN-B3 14 258 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr1691g00002 Mupr-Chr1691 10731 13856 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr1691g00002 9 197 Expansin Gene Family AT4G28250 69.271 2.16e-94 275
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr1691g00002 K20628 - gmx:100780112 509.22