Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr16919g00001 ATGGCTGACCCTTACTCCAATTTCTTCTCCTCGTCTGGCTTCTTCCGTTTCCCATCTTCAAACCCTTCCCCTCAACACGCTCCCTATGTCCACCACAACAACTTCATCAACCACGCCAAAACCAACGACACCACCTTTTTCCACTACCACCACCACACTACTAATACTACTTTTTCTTCTTTGCCACCTTCTTCCCCTCCTTTGAGAGAAGAACTCCCCCTCTTGAGGCTGAGCCCCGCGAAGCAAGAGGAGGAGGAAGAAGAGGACCTGTCTTGCACTGGGGCCATGGATGTGGAGGAGAAGCTCCACATCCACCACCCCAAAGAGGAGGAAGATGATGAAGATGCCACTGTCACTGTTGCACTCCACATAGGGTTGCCAAGCCCTAGTGCTGCTGAGATGGCTTCTGTCCTCTCTTCTTCCTCAGACAAAGAACATGGAGATGGGGGTGCTGACGATTCTTCTGCTTCCTTCAGACTCAACAAGGGTCAGTACTGGATCCCTACTCCTTCTCAGATTCTCATTGGTCCTACTCAGTTCTCTTGCCCTGTTTGCTGCAAAACTTTCAACAGATACAACAACATGCAGATGCATATGTGGGGGCATGGATCACAGTACAGAAAAGGACCTGAATCTCTGAGGGGTACCCAACCAACCGGCATGCTGAGGCTTCCTTGCTATTGTTGTGCCCCAGGGTGCAGAAACAACATTGACCACCCGAGAGCAAAGCCTCTCAAAGATTTTAGAACACTCCAAACGCACTACAAGAGGAAGCATGGCATTAAGCCCTTCATGTGCAGGAAATGCGGCAAGGCTTTTGCTGTGAGGGGAGATTGGAGAACTCATGAGAAGAACTGTGGCAAGCTTTGGTACTGTATCTGCGGCTCCGATTTCAAGCACAAGAGGTCTCTCAAAGACCATATTAAGGCTTTTGGGAGTGGCCATGCAGCTTATGGGATCGATGGCTTCGAAGAAGAGGATGAGCCAGCTTCTGAAGTAGAGCAAGATAATGATTCCACCCAGTGA 1026 0.4981 MADPYSNFFSSSGFFRFPSSNPSPQHAPYVHHNNFINHAKTNDTTFFHYHHHTTNTTFSSLPPSSPPLREELPLLRLSPAKQEEEEEEDLSCTGAMDVEEKLHIHHPKEEEDDEDATVTVALHIGLPSPSAAEMASVLSSSSDKEHGDGGADDSSASFRLNKGQYWIPTPSQILIGPTQFSCPVCCKTFNRYNNMQMHMWGHGSQYRKGPESLRGTQPTGMLRLPCYCCAPGCRNNIDHPRAKPLKDFRTLQTHYKRKHGIKPFMCRKCGKAFAVRGDWRTHEKNCGKLWYCICGSDFKHKRSLKDHIKAFGSGHAAYGIDGFEEEDEPASEVEQDNDSTQ 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr16919g00001 341 FunFam Zinc finger protein WIP2 233 315 - -
Mupr16919g00001 341 PANTHER ZINC FINGER PROTEIN WIP2 34 337 IPR043584 GO:0003700|GO:0010468
Mupr16919g00001 341 SMART c2h2final6 264 284 IPR013087 -
Mupr16919g00001 341 SMART c2h2final6 180 202 IPR013087 -
Mupr16919g00001 341 ProSiteProfiles Zinc finger C2H2 type domain profile. 264 284 IPR013087 -
Mupr16919g00001 341 ProSiteProfiles Zinc finger C2H2 type domain profile. 180 207 IPR013087 -
Mupr16919g00001 341 Gene3D Classic Zinc Finger 179 202 - -
Mupr16919g00001 341 SUPERFAMILY beta-beta-alpha zinc fingers 246 284 IPR036236 -
Mupr16919g00001 341 ProSitePatterns Zinc finger C2H2 type domain signature. 182 202 IPR013087 -
Mupr16919g00001 341 Gene3D Classic Zinc Finger 242 317 - -
Mupr16919g00001 341 MobiDBLite consensus disorder prediction 132 156 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr16919g00001 Mupr-Chr16919 1219 3508 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr16919g00001 1 338 C2H2 Transcription Factor Family AT3G57670 62.565 2.47e-145 414
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Mupr16919g00001 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr16919g00001 - - gmx:100802907 566.229