Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr1690g00003 ATGGACTTCACTAATCACTTCCTCTTCTTGTTGTTGCAATTTATCGTGGTTCTGGGTTATGCTACTAAACCAGGGGTACGATTGGATATTCAAGATAAACATGTGATAATGGATAATGGCATCGTTCAGGTCAACTTATCAAATCCTGAAGGAATTGTCACAGGAATTCAGTATAATGGGCTCGACAATTTGCTCGAAGTTCTTAACGATGAATCTGATAGAGGGTACTGGGATATCGTCTGGGACCAAGGTGGCAAAAATAGAACAAAAAAAGGAGCAAAGGGAAAGGGTACATTTGACAGGTTTGATTCATTCAGAGAAATTAGGCCTGTATAA 336 0.3929 MDFTNHFLFLLLQFIVVLGYATKPGVRLDIQDKHVIMDNGIVQVNLSNPEGIVTGIQYNGLDNLLEVLNDESDRGYWDIVWDQGGKNRTKKGAKGKGTFDRFDSFREIRPV 111
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr1690g00003 111 Pfam Rhamnogalacturonate lyase family 25 95 IPR010325 -
Mupr1690g00003 111 PANTHER RHAMNOGALACTURONATE LYASE FAMILY PROTEIN 31 87 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr1690g00003 Mupr-Chr1690 61897 62788 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr1690g00003 25 100 Polysaccharide Lyase AT1G09910 55.263 6.49e-23 90.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr1690g00003 K18195 - gmx:100786488 185.652