Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr16881g00004 ATGCAATGGTTAAAACGGCCACGTGCCAACATCATGACAAAGGAAGTGAAATTCAAAATTCAAAAACCATGCAAATACTTTAACAGTTCAAGGGGTTGCCGCAATGGTTCTAATTGCCATTATCAGCATGACATGTTAGGAATGAGTCGAATTACTAAAAGACTGAAAGGCACTAACACATACAAAATTAGGGTTCTAGAAAACCCCCTTCTACCCATAGTTATACTCACATCCTTGAGCAAGATTTCTCATTTCCCCTTACCTAGAACGTTGACTCCAAGCAAAGGCTTTATTTCTCAAAGTCCTCCTCCTTTATGCTCTACAACGACACCACAAACGAGTTCAGAAGAAAAGTTTCTAACGCACTAG 369 0.3957 MQWLKRPRANIMTKEVKFKIQKPCKYFNSSRGCRNGSNCHYQHDMLGMSRITKRLKGTNTYKIRVLENPLLPIVILTSLSKISHFPLPRTLTPSKGFISQSPPPLCSTTTPQTSSEEKFLTH 122
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr16881g00004 122 Gene3D - 10 110 - -
Mupr16881g00004 122 SUPERFAMILY CCCH zinc finger 23 47 IPR036855 GO:0046872
Mupr16881g00004 122 ProSiteProfiles Zinc finger C3H1-type profile. 18 46 IPR000571 GO:0046872
Mupr16881g00004 122 MobiDBLite consensus disorder prediction 95 122 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr16881g00004 Mupr-Chr16881 5817 7240 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Mupr16881g00004 zf-CCCH 0.00011 CL0537
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr16881g00004 - - pvu:PHAVU_002G110100g 65.0846