Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr16880g00002 ATGGAGAAAATATGTGGTGCCAGTTTTGGCAACATGTTGAATCAGGCAAAGCCATATTTGCTAACTGTGGGGTTGCAATTTGGGATGGCTGGAACATTCATTGCCATGAAGAACTGTCTGGATCATGGAATGGGTCGTTTTGTGTTGTCTTTCTATCGCAATGTCTTTGCCGCATTTGCCCTTGCTCCTTTTGCGCTTATCTTTGAAAGGAACGTTAGACCCAAAATGACAATGTCTGTCTTCTTGCAGATTCTGGCCCTCGGACTTCTTGAGCCACTGGTTGACCAAAGCTTCACTTCTTTAGGGATGCAATATACTTCAGCTTCATTTGCATCTGCTATTATGAACGCTGTACCCTCCATAACATTTGTGCTAGCAGTAATCCTCAGCTTAGAGCGTGTGAAGTTGAATGAGCTACGCAGTGAAGCGAAGGTGATTGGAACTTTGGTTACTTTTGGTGGGGCTTTGTTGATGACACTTTACAAAGGCCCAAAAATGAACCTACTTAACCATCGAAACACTAGCCACGAGAAAGATGAAAGCCATTCCCATGAGGGTCACAAACACTGGGTCACAGGAACCCTATTTTTATGCCTTGGTTGTTTGGCTTGGTCCTCCTTTTACATTTTGCAGTCCGTTACGGTGAAAAGGTACCCAGCGGAACTATCACTGTCGTGTTTGATATGCTTTGCGGGTGCATTGCAAAATGCCGTGGTTGCGCTCATTGCTGATCATAACCCTCACGCATGGGCCATCGGTTTCGACTACAGGTTCTACGGTCCACTTTATGCTGGAATAATGAGTTCAGGAATAACATATTATGTACAAGGGCTGGTAATGAAAAGCAGAGGCCCAGTGTTTATGACATCCTTTAATCCTCTATTAATGATCATTGTTGCTACTTTGGGCTCTTTTCTTCTTGGAGAACAGCTCTACTTAGGAAGTATCATTGGCTCCATTATTATCGTCGTGGGTCTTTATTTGGTGGTGTGGGGTAAAGCCAAAGACTATCCTGATCTCACATCAACATCAACAAAGGAAACAGAAGCACAACAGCTCCCAATTAGCTCATCAACTCATAAATAG 1086 0.4365 MEKICGASFGNMLNQAKPYLLTVGLQFGMAGTFIAMKNCLDHGMGRFVLSFYRNVFAAFALAPFALIFERNVRPKMTMSVFLQILALGLLEPLVDQSFTSLGMQYTSASFASAIMNAVPSITFVLAVILSLERVKLNELRSEAKVIGTLVTFGGALLMTLYKGPKMNLLNHRNTSHEKDESHSHEGHKHWVTGTLFLCLGCLAWSSFYILQSVTVKRYPAELSLSCLICFAGALQNAVVALIADHNPHAWAIGFDYRFYGPLYAGIMSSGITYYVQGLVMKSRGPVFMTSFNPLLMIIVATLGSFLLGEQLYLGSIIGSIIIVVGLYLVVWGKAKDYPDLTSTSTKETEAQQLPISSSTHK 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr16880g00002 361 SUPERFAMILY Multidrug resistance efflux transporter EmrE 255 334 - -
Mupr16880g00002 361 SUPERFAMILY Multidrug resistance efflux transporter EmrE 52 163 - -
Mupr16880g00002 361 PANTHER WAT1-RELATED PROTEIN 17 341 IPR030184 GO:0016020|GO:0022857
Mupr16880g00002 361 Pfam EamA-like transporter family 193 330 IPR000620 GO:0016020
Mupr16880g00002 361 Pfam EamA-like transporter family 18 159 IPR000620 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr16880g00002 Mupr-Chr16880 6482 13003 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr16880g00002 10 357 Nodulin-like Gene Family AT1G44800 47.564 2.96e-115 337
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr16880g00002 - - gmx:100812238 540.036